HHsearch results for GI: 254780978 and protein with PDBid: 1o9p_A

>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A
Probab=100.00  E-value=0  Score=709.36  Aligned_cols=409  Identities=25%  Similarity=0.390  Sum_probs=347.0

Q ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCC-CCCCCCCEEHHHHHCCCC
Q ss_conf             5099999999968987899999999999996885558999888999999999999997888-988661212232000048
Q gi|254780978|r    7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATK   85 (493)
Q Consensus         7 ~s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~-~~pL~GiPi~vKD~~~v~   85 (493)
                      |||+||++++++|++||+||+++|++||+++|+.+||+++++.+             +.++ .+|||||||+|||+|+||
T Consensus         2 ls~~~l~~~~~~~~~s~~~~~~~~l~ri~~~~~~lna~~~~~~~-------------~~~~~~gpL~GiPi~vKD~~~~~   68 (414)
T 1o9p_A            2 ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKS-------------ARAQASGPLRGIAVGIKDIIDTA   68 (414)
T ss_dssp             CCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTT-------------CCCCSSSTTTTCEEEEETTBCCS
T ss_pred             CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH-------------HHCCCCCCCCCCEEEEECCCCCC
T ss_conf             67899999998699989999999999999869703980610398-------------61766798578889988470778


Q ss_pred             CCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78553303765157544432104688874000011100000135665322223433566767656655445554445421
Q gi|254780978|r   86 GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA  165 (493)
Q Consensus        86 g~~tt~G~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G~a~  165 (493)
                      |++||+|+..+.++++.+|+++|++|+++|||++||||||||+++.      +|.+.||||+.     +++||||||+|+
T Consensus        69 G~~tt~Gs~~~~~~~~~~da~~v~~L~~aGai~~gktn~~e~~~~~------~~~~~np~~~~-----~~~GGSSgGsaa  137 (414)
T 1o9p_A           69 NMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRD------PTATLNPHNTG-----HSPGGASSGSAA  137 (414)
T ss_dssp             SSCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSC------CCSCCBTTBTT-----BCCCSSSHHHHH
T ss_pred             CCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHCCC------CCCCCCCCCCC-----CCCCCCCCHHHH
T ss_conf             9740653876507997551299999996898899603326540588------98878988876-----778998758999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             00123343224321121111305541110115454100011233222212123544322023446653022467431011
Q gi|254780978|r  166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC  245 (493)
Q Consensus       166 ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D~~~  245 (493)
                      +||+|++++++|||||||||+||+||||||||||+||||+.|+.|.++++|++|||||+|+|+++++++|.++|+.|+..
T Consensus       138 ava~g~~~~a~GtDtgGSiR~PAa~cGv~GlKPT~G~i~~~g~~~~~~~~d~~Gp~arsv~D~a~~l~~l~g~~~~~~~~  217 (414)
T 1o9p_A          138 AVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIV  217 (414)
T ss_dssp             HHHTTSCSEEEEEESSSTTHHHHHHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCGGGSSCC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             99818874467477899875481641455444788988898875556543544431120889999998751898555568


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHH
Q ss_conf             1124653101244432222223434444333201456556656654332211013568872145-555444445678988
Q gi|254780978|r  246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY-ALPAYYIISPAEASS  324 (493)
Q Consensus       246 ~~~~~~~~~~~~~~~~k~lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~-~~~~~~~~~~~e~~~  324 (493)
                                    +.++.+++++++.+...+++++.++++++++.|+++|+++++++++.... ....+..+...|...
T Consensus       218 --------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~e~~~  283 (414)
T 1o9p_A          218 --------------PAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHR  283 (414)
T ss_dssp             --------------CCSSCEEEECCCGGGCCCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             --------------753344554444223440278888899999999976982798327136666777755566899999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             87765333103100243102455432100001466666530233333200012233457899999999999986399899
Q gi|254780978|r  325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI  404 (493)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D~l  404 (493)
                      .+..+                 +.. ....+.+.++.++..+     ......+|.++++.|..++++|.++|+ +||+|
T Consensus       284 ~l~~~-----------------~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~r~~~~~~~~~~~~-~~D~l  339 (414)
T 1o9p_A          284 ALAWE-----------------FSE-HHDEIAPMLRASLDAT-----VGLTPKEYDEARRIGRRGRRELGEVFE-GVDVL  339 (414)
T ss_dssp             HTHHH-----------------HHH-SGGGSCHHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHHTT-TCSEE
T ss_pred             HHHHH-----------------HHH-HHCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_conf             98988-----------------654-0001331565543321-----001103578999999999999999983-79999


Q ss_pred             EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             91799899987763346732578876437899999878983768403559998379999518998799999999999992
Q gi|254780978|r  405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA  484 (493)
Q Consensus       405 I~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E~~~  484 (493)
                      |+||++.++|++......        ...||.+||++|+|+++||+|. .+|||+||||||++|+|++||++|++||+++
T Consensus       340 l~Pt~p~~ap~~~~~~~~--------~~~~t~~~Nl~G~PaisvP~g~-~~GlPvGlQivg~~~~D~~lL~~A~~lE~al  410 (414)
T 1o9p_A          340 LTYSAPGTAPAKALASTG--------DPRYNRLWTLMGNPCVNVPVLK-VGGLPIGVQVIARFGNDAHALATAWFLEDAL  410 (414)
T ss_dssp             EEESSSSSCCBGGGCCCC--------CGGGTHHHHHHCCCEEEEEEEE-ETTEEEEEEEEESTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCCCCCCC--------CHHHHHHHHHHCCCEEEEECCC-CCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             968998766630004568--------7677599999789849983678-9996176888899998899999999999996


Q ss_pred             CC
Q ss_conf             57
Q gi|254780978|r  485 GY  486 (493)
Q Consensus       485 ~~  486 (493)
                      +.
T Consensus       411 ~~  412 (414)
T 1o9p_A          411 AK  412 (414)
T ss_dssp             HC
T ss_pred             HH
T ss_conf             05