HHsearch results for GI: 254780978 and protein with PDBid: 1o9p_A
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A
Probab=100.00 E-value=0 Score=709.36 Aligned_cols=409 Identities=25% Similarity=0.390 Sum_probs=347.0
Q ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCC-CCCCCCCEEHHHHHCCCC
Q ss_conf 5099999999968987899999999999996885558999888999999999999997888-988661212232000048
Q gi|254780978|r 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATK 85 (493)
Q Consensus 7 ~s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~-~~pL~GiPi~vKD~~~v~ 85 (493)
|||+||++++++|++||+||+++|++||+++|+.+||+++++.+ +.++ .+|||||||+|||+|+||
T Consensus 2 ls~~~l~~~~~~~~~s~~~~~~~~l~ri~~~~~~lna~~~~~~~-------------~~~~~~gpL~GiPi~vKD~~~~~ 68 (414)
T 1o9p_A 2 ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKS-------------ARAQASGPLRGIAVGIKDIIDTA 68 (414)
T ss_dssp CCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTT-------------CCCCSSSTTTTCEEEEETTBCCS
T ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH-------------HHCCCCCCCCCCEEEEECCCCCC
T ss_conf 67899999998699989999999999999869703980610398-------------61766798578889988470778
Q ss_pred CCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78553303765157544432104688874000011100000135665322223433566767656655445554445421
Q gi|254780978|r 86 GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 (493)
Q Consensus 86 g~~tt~G~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G~a~ 165 (493)
|++||+|+..+.++++.+|+++|++|+++|||++||||||||+++. +|.+.||||+. +++||||||+|+
T Consensus 69 G~~tt~Gs~~~~~~~~~~da~~v~~L~~aGai~~gktn~~e~~~~~------~~~~~np~~~~-----~~~GGSSgGsaa 137 (414)
T 1o9p_A 69 NMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRD------PTATLNPHNTG-----HSPGGASSGSAA 137 (414)
T ss_dssp SSCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSC------CCSCCBTTBTT-----BCCCSSSHHHHH
T ss_pred CCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHCCC------CCCCCCCCCCC-----CCCCCCCCHHHH
T ss_conf 9740653876507997551299999996898899603326540588------98878988876-----778998758999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 00123343224321121111305541110115454100011233222212123544322023446653022467431011
Q gi|254780978|r 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 (493)
Q Consensus 166 ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D~~~ 245 (493)
+||+|++++++|||||||||+||+||||||||||+||||+.|+.|.++++|++|||||+|+|+++++++|.++|+.|+..
T Consensus 138 ava~g~~~~a~GtDtgGSiR~PAa~cGv~GlKPT~G~i~~~g~~~~~~~~d~~Gp~arsv~D~a~~l~~l~g~~~~~~~~ 217 (414)
T 1o9p_A 138 AVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIV 217 (414)
T ss_dssp HHHTTSCSEEEEEESSSTTHHHHHHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCGGGSSCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99818874467477899875481641455444788988898875556543544431120889999998751898555568
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHH
Q ss_conf 1124653101244432222223434444333201456556656654332211013568872145-555444445678988
Q gi|254780978|r 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY-ALPAYYIISPAEASS 324 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~k~lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~-~~~~~~~~~~~e~~~ 324 (493)
+.++.+++++++.+...+++++.++++++++.|+++|+++++++++.... ....+..+...|...
T Consensus 218 --------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~e~~~ 283 (414)
T 1o9p_A 218 --------------PAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHR 283 (414)
T ss_dssp --------------CCSSCEEEECCCGGGCCCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf --------------753344554444223440278888899999999976982798327136666777755566899999
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 87765333103100243102455432100001466666530233333200012233457899999999999986399899
Q gi|254780978|r 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 (493)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D~l 404 (493)
.+..+ +.. ....+.+.++.++..+ ......+|.++++.|..++++|.++|+ +||+|
T Consensus 284 ~l~~~-----------------~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~r~~~~~~~~~~~~-~~D~l 339 (414)
T 1o9p_A 284 ALAWE-----------------FSE-HHDEIAPMLRASLDAT-----VGLTPKEYDEARRIGRRGRRELGEVFE-GVDVL 339 (414)
T ss_dssp HTHHH-----------------HHH-SGGGSCHHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHHTT-TCSEE
T ss_pred HHHHH-----------------HHH-HHCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_conf 98988-----------------654-0001331565543321-----001103578999999999999999983-79999
Q ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 91799899987763346732578876437899999878983768403559998379999518998799999999999992
Q gi|254780978|r 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 (493)
Q Consensus 405 I~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E~~~ 484 (493)
|+||++.++|++...... ...||.+||++|+|+++||+|. .+|||+||||||++|+|++||++|++||+++
T Consensus 340 l~Pt~p~~ap~~~~~~~~--------~~~~t~~~Nl~G~PaisvP~g~-~~GlPvGlQivg~~~~D~~lL~~A~~lE~al 410 (414)
T 1o9p_A 340 LTYSAPGTAPAKALASTG--------DPRYNRLWTLMGNPCVNVPVLK-VGGLPIGVQVIARFGNDAHALATAWFLEDAL 410 (414)
T ss_dssp EEESSSSSCCBGGGCCCC--------CGGGTHHHHHHCCCEEEEEEEE-ETTEEEEEEEEESTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCC--------CHHHHHHHHHHCCCEEEEECCC-CCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 968998766630004568--------7677599999789849983678-9996176888899998899999999999996
Q ss_pred CC
Q ss_conf 57
Q gi|254780978|r 485 GY 486 (493)
Q Consensus 485 ~~ 486 (493)
+.
T Consensus 411 ~~ 412 (414)
T 1o9p_A 411 AK 412 (414)
T ss_dssp HC
T ss_pred HH
T ss_conf 05