HHsearch results for GI: 254780978 and protein with PDBid: 3h0l_A

>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Probab=100.00  E-value=0  Score=843.12  Aligned_cols=473  Identities=46%  Similarity=0.771  Sum_probs=438.1

Q ss_pred             CHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCC
Q ss_conf             13450999999999689878999999999999968855589998889999999999999978889886612122320000
Q gi|254780978|r    4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA   83 (493)
Q Consensus         4 ~~~~s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~~pL~GiPi~vKD~~~   83 (493)
                      |..+||+||+++|++|++||+||+++|++||+++|+.+|||+++++|+||++|+++|+     +.+|||||||+|||+|+
T Consensus         2 l~~~s~~~l~~~~~~g~~s~~~v~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~-----~~~pL~GvPi~vKD~~~   76 (478)
T 3h0l_A            2 LWKKSLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKE-----RELPLFGIPIAVKDNIL   76 (478)
T ss_dssp             CTTSCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHTCCC-----TTSTTTTCEEEEETTBC
T ss_pred             CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC-----CCCCCCCCEEEEECCCC
T ss_conf             4341199999999869997999999999999986986419998296999999985597-----89994888788886647


Q ss_pred             CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             48785533037651575444321046888740000111000001356653222234335667676566554455544454
Q gi|254780978|r   84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS  163 (493)
Q Consensus        84 v~g~~tt~G~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G~  163 (493)
                      |+|++||+|+.+++++++.+|+++|++||++|||++||||+|||+++.+|.|.+||+|+||||+.     ++||||||||
T Consensus        77 v~G~~tt~Gs~~~~~~~~~~~~~~v~~l~~aGai~~gkt~~~e~~~~~~~~~~~~g~~~np~~~~-----~~pGGSSgGs  151 (478)
T 3h0l_A           77 VEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLE-----RVPGGSSGGS  151 (478)
T ss_dssp             CTTSBCCTTCGGGTTCBCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCCTTCTT-----BCCCSSSHHH
T ss_pred             CCCCCCCCCCHHHCCCCCCCCCEEEEHHHHCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCH
T ss_conf             78975487586455799976550011276489877246322221466654565567878887744-----5877888703


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             21001233432243211211113055411101154541000112332222121235443220234466530224674310
Q gi|254780978|r  164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA  243 (493)
Q Consensus       164 a~ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D~  243 (493)
                      ||+||+|++++|||||||||||+||+||||||||||+||||+.|++|+++++||+|||||||+|+++++++|.|+|+.|+
T Consensus       152 aaavAag~~~~aiGtD~gGSiR~PAa~~Gv~G~kPt~g~vs~~G~~~~~~~~dtvGpmaRsv~D~a~~~~~l~g~d~~d~  231 (478)
T 3h0l_A          152 AASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDS  231 (478)
T ss_dssp             HHHHHHTSSSCEEEECSSSTTHHHHHHHTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHHHHHHHBSCCTTCT
T ss_pred             HHHHHCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCC
T ss_conf             33211487356501687861202179739546728898667999888776668537625329999999999709987786


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             11112465310124443222222343444433320145655665665433221101356887214555544444567898
Q gi|254780978|r  244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS  323 (493)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~k~lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~~~~~~~~~~~~e~~  323 (493)
                      .+...+.+++...+..+++++||||+.+++...+++++.++++++++.|+++|++|+|+++|......+.|+.+...|+.
T Consensus       232 ~s~~~~~~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~ei~~p~~~~~~~~~~~~~~~e~~  311 (478)
T 3h0l_A          232 TSAKVPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEKEGFEIKEVSLPHVKYSIPTYYIIAPSEAS  311 (478)
T ss_dssp             TSCCCCCCCHHHHTTCCCTTCEEEEEGGGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEECCTTGGGHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf             54468872155663136678789998612145589999999999999999789999993686456678899999999999


Q ss_pred             HHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             88776533310310-02431024554321000014666665302333332000122334578999999999999863998
Q gi|254780978|r  324 SNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD  402 (493)
Q Consensus       324 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D  402 (493)
                      .++..|++..+..+ .+..++++.+.+.+...+++.+..+++.+....+....+++|.++++.|..++..+.++|. ++|
T Consensus       312 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~-~~D  390 (478)
T 3h0l_A          312 SNLARYDGVRYGYRAKEYKDIFEMYARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQKVRRLITNDFLKAFE-EVD  390 (478)
T ss_dssp             HHTTTCSSSSSSCCCSCCSSHHHHHHHHHHHHSCHHHHHHHHHHHHHTSTTTTTTTHHHHHHHHHHHHHHHHHHTT-TCS
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCC
T ss_conf             8799764310002122067899999863122059899999996544315301599999999999999999999862-799


Q ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             99917998999877633467325788764378999998789837684035599983799995189987999999999999
Q gi|254780978|r  403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK  482 (493)
Q Consensus       403 ~lI~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E~  482 (493)
                      +||+|+++.+|+++++....  ....+....||.++|++|+|++|||+|+. +|||+||||||++|+|++||++|++||+
T Consensus       391 ~li~Pt~~~~a~~~~~~~~~--~~~~~~~~~~T~~~Nl~G~PaisvP~G~~-~GlPvGvQlig~~~~D~~LL~vA~~~E~  467 (478)
T 3h0l_A          391 VIASPTTPTLPFKFGERLEN--PIEMYLSDILTVPANLAGLPAISIPIAWK-DGLPVGGQLIGKHWDETTLLQISYLWEQ  467 (478)
T ss_dssp             EEEEESCSSSCCBTTTTSSS--HHHHHGGGTTTHHHHHHTCCEEEEEEEEE-TTEEEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHCCCEEEEECCCC-CCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             99958988878776555478--79987510798888986899499847888-9965648888999999999999999997


Q ss_pred             HHCCC-CCC
Q ss_conf             92577-978
Q gi|254780978|r  483 EAGYF-RPH  490 (493)
Q Consensus       483 ~~~~~-~pp  490 (493)
                      +++|+ |+|
T Consensus       468 ~~~~~~~~P  476 (478)
T 3h0l_A          468 KFKHYEKIP  476 (478)
T ss_dssp             HSCGGGCCS
T ss_pred             HCCCCCCCC
T ss_conf             279999999