HHsearch results for GI: 254780978 and protein with PDBid: 3h0l_A
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Probab=100.00 E-value=0 Score=843.12 Aligned_cols=473 Identities=46% Similarity=0.771 Sum_probs=438.1
Q ss_pred CHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCC
Q ss_conf 13450999999999689878999999999999968855589998889999999999999978889886612122320000
Q gi|254780978|r 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 (493)
Q Consensus 4 ~~~~s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~~pL~GiPi~vKD~~~ 83 (493)
|..+||+||+++|++|++||+||+++|++||+++|+.+|||+++++|+||++|+++|+ +.+|||||||+|||+|+
T Consensus 2 l~~~s~~~l~~~~~~g~~s~~~v~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~-----~~~pL~GvPi~vKD~~~ 76 (478)
T 3h0l_A 2 LWKKSLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKE-----RELPLFGIPIAVKDNIL 76 (478)
T ss_dssp CTTSCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHTCCC-----TTSTTTTCEEEEETTBC
T ss_pred CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC-----CCCCCCCCEEEEECCCC
T ss_conf 4341199999999869997999999999999986986419998296999999985597-----89994888788886647
Q ss_pred CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 48785533037651575444321046888740000111000001356653222234335667676566554455544454
Q gi|254780978|r 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS 163 (493)
Q Consensus 84 v~g~~tt~G~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G~ 163 (493)
|+|++||+|+.+++++++.+|+++|++||++|||++||||+|||+++.+|.|.+||+|+||||+. ++||||||||
T Consensus 77 v~G~~tt~Gs~~~~~~~~~~~~~~v~~l~~aGai~~gkt~~~e~~~~~~~~~~~~g~~~np~~~~-----~~pGGSSgGs 151 (478)
T 3h0l_A 77 VEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLE-----RVPGGSSGGS 151 (478)
T ss_dssp CTTSBCCTTCGGGTTCBCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCCTTCTT-----BCCCSSSHHH
T ss_pred CCCCCCCCCCHHHCCCCCCCCCEEEEHHHHCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCH
T ss_conf 78975487586455799976550011276489877246322221466654565567878887744-----5877888703
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 21001233432243211211113055411101154541000112332222121235443220234466530224674310
Q gi|254780978|r 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 (493)
Q Consensus 164 a~ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D~ 243 (493)
||+||+|++++|||||||||||+||+||||||||||+||||+.|++|+++++||+|||||||+|+++++++|.|+|+.|+
T Consensus 152 aaavAag~~~~aiGtD~gGSiR~PAa~~Gv~G~kPt~g~vs~~G~~~~~~~~dtvGpmaRsv~D~a~~~~~l~g~d~~d~ 231 (478)
T 3h0l_A 152 AASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDS 231 (478)
T ss_dssp HHHHHHTSSSCEEEECSSSTTHHHHHHHTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHHHHHHHBSCCTTCT
T ss_pred HHHHHCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCC
T ss_conf 33211487356501687861202179739546728898667999888776668537625329999999999709987786
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 11112465310124443222222343444433320145655665665433221101356887214555544444567898
Q gi|254780978|r 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~k~lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~~~~~~~~~~~~e~~ 323 (493)
.+...+.+++...+..+++++||||+.+++...+++++.++++++++.|+++|++|+|+++|......+.|+.+...|+.
T Consensus 232 ~s~~~~~~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~ei~~p~~~~~~~~~~~~~~~e~~ 311 (478)
T 3h0l_A 232 TSAKVPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEKEGFEIKEVSLPHVKYSIPTYYIIAPSEAS 311 (478)
T ss_dssp TSCCCCCCCHHHHTTCCCTTCEEEEEGGGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEECCTTGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 54468872155663136678789998612145589999999999999999789999993686456678899999999999
Q ss_pred HHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 88776533310310-02431024554321000014666665302333332000122334578999999999999863998
Q gi|254780978|r 324 SNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 (493)
Q Consensus 324 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D 402 (493)
.++..|++..+..+ .+..++++.+.+.+...+++.+..+++.+....+....+++|.++++.|..++..+.++|. ++|
T Consensus 312 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~-~~D 390 (478)
T 3h0l_A 312 SNLARYDGVRYGYRAKEYKDIFEMYARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQKVRRLITNDFLKAFE-EVD 390 (478)
T ss_dssp HHTTTCSSSSSSCCCSCCSSHHHHHHHHHHHHSCHHHHHHHHHHHHHTSTTTTTTTHHHHHHHHHHHHHHHHHHTT-TCS
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCC
T ss_conf 8799764310002122067899999863122059899999996544315301599999999999999999999862-799
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99917998999877633467325788764378999998789837684035599983799995189987999999999999
Q gi|254780978|r 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 (493)
Q Consensus 403 ~lI~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E~ 482 (493)
+||+|+++.+|+++++.... ....+....||.++|++|+|++|||+|+. +|||+||||||++|+|++||++|++||+
T Consensus 391 ~li~Pt~~~~a~~~~~~~~~--~~~~~~~~~~T~~~Nl~G~PaisvP~G~~-~GlPvGvQlig~~~~D~~LL~vA~~~E~ 467 (478)
T 3h0l_A 391 VIASPTTPTLPFKFGERLEN--PIEMYLSDILTVPANLAGLPAISIPIAWK-DGLPVGGQLIGKHWDETTLLQISYLWEQ 467 (478)
T ss_dssp EEEEESCSSSCCBTTTTSSS--HHHHHGGGTTTHHHHHHTCCEEEEEEEEE-TTEEEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHCCCEEEEECCCC-CCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99958988878776555478--79987510798888986899499847888-9965648888999999999999999997
Q ss_pred HHCCC-CCC
Q ss_conf 92577-978
Q gi|254780978|r 483 EAGYF-RPH 490 (493)
Q Consensus 483 ~~~~~-~pp 490 (493)
+++|+ |+|
T Consensus 468 ~~~~~~~~P 476 (478)
T 3h0l_A 468 KFKHYEKIP 476 (478)
T ss_dssp HSCGGGCCS
T ss_pred HCCCCCCCC
T ss_conf 279999999