RPSBLAST alignment of GI: 254780978 and protein with PDBid: 2dc0
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434
Score = 226 bits (575), Expect = 1e-59
Identities = 127/483 (26%), Positives = 205/483 (42%), Gaps = 53/483 (10%)
Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66
M + E++ L + + + L++ ++ + + NA + + AR A + + G
Sbjct: 1 MDLLEAKRLLETGRTTPLALLEEALERAKAFQDR-NALAYLDEEAARKEALALTEELRRG 59
Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125
R L G+P+ +KD F KG+ T+A + P V + + NM
Sbjct: 60 QVRGPLHGLPLTVKDLFPVKGMPTRAGTKAPLPPLPEEARAVRRLREAGALLFAKT-NMH 118
Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185
E A+G + E + GPV + GGSSGGS+ AVA + AS+GTDTGGSIR
Sbjct: 119 EIALGITGENPWTGPVRNAVDPS-----RQAGGSSGGSAVAVALGIGLASLGTDTGGSIR 173
Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245
PA F G VG KP+YGR S G + + S D AG +TR+VRD+ L + +AG
Sbjct: 174 IPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGES------ 227
Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305
+ +Q G+P ++ L + K + + + L A++ E+SLP
Sbjct: 228 ----------IPLEGVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP 277
Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365
++ R E I E GF +V+ ++
Sbjct: 278 LEGVYEVYTRLV-------------------RYEAARIHEKALKEHPEGFSPQVREALLA 318
Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425
G + D+ R +GVD +L P P A PLG EE S
Sbjct: 319 GLALTEKDYRDAVA------EREALRLELVKALRGVDALLLPVQPLPAPPLGTEEVELES 372
Query: 426 MGHIYND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482
+ + T+ ++ G+P +++P A E MP+GLQ++G + + ++G +E
Sbjct: 373 GRKGHREAFITLTLPFSLLGVPTLALPFAKVE-GMPVGLQVVGAYGEDGKVLALGGWLEA 431
Query: 483 EAG 485
G
Sbjct: 432 RLG 434