RPSBLAST alignment of GI: 254780978 and protein with PDBid: 2gi3

>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structural genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 Length = 476

 Score =  386 bits (991), Expect = e-108
 Identities = 193/492 (39%), Positives = 300/492 (60%), Gaps = 24/492 (4%)

Query: 1   MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60
           M +L+F  ++   + L+  +    +L    ++ I+  +  + A+I V    +        
Sbjct: 2   MIDLDFRKLT-IEECLKLSEEEREKLPQLSLETIKRLDPHVKAFISVRENVSVEKK---- 56

Query: 61  KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120
                       GIP+ IKD   T G+ T   S IL+ +   +++TV +K+ + G V++G
Sbjct: 57  --------GKFWGIPVAIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVG 108

Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180
           K N+DEFAMGSS E S + P  +PW          PGGSSGGS+AAV+  +  A++G+DT
Sbjct: 109 KANLDEFAMGSSTERSAFFPTRNPWDLE-----RVPGGSSGGSAAAVSAGMVVAALGSDT 163

Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240
           GGS+RQPAS  G VG KPTYG  SR G+++FA SLDQ G IT+TVRD+AIL++ I+G DE
Sbjct: 164 GGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDE 223

Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300
            DAT VN  V      +++ + GM   +P+E     +   + + +++ +  L+  GAK+ 
Sbjct: 224 NDATTVNRKVDFL-SEIEEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVE 282

Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360
            + +PH +Y++  YY+I+PAEASSNLAR+DGV+YGLR++ K + EMY  TR++GFG+EV+
Sbjct: 283 RVKIPHIKYSVATYYVIAPAEASSNLARFDGVKYGLRIKEKGLREMYMKTRNVGFGEEVR 342

Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420
            RIMIGT+ LS+  Y++++ +A K+R  I  +  E   Q  D ILTPT+P +AF +G+ +
Sbjct: 343 RRIMIGTFTLSAAYYEAYFNKAMKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIK 401

Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480
           +    + +   D+FT+  N+AGLPAISVP       +P+G+Q+IG+ F +  +F + + I
Sbjct: 402 D---PLTYYLMDIFTIPANLAGLPAISVPFGF-SNNLPVGVQVIGRRFADGKVFRIARAI 457

Query: 481 EKEAGYFRPHKW 492
           EK + Y     +
Sbjct: 458 EKNSPYNENGMF 469