RPSBLAST alignment of GI: 254780978 and SCOP domain: d1m22a_

Alignment
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490
 Score =  243 bits (620), Expect = 2e-65
 Identities = 135/500 (27%), Positives = 222/500 (44%), Gaps = 24/500 (4%)

Query: 3   ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59
                 V++ + R+ + ++ +  L  +Y   I A++ +  ++ A IE+    A   A E 
Sbjct: 3   PYAETDVADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPD-ALKEAAER 61

Query: 60  DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118
           D+   +G  R  L GIP+ +KD      + T A S  L GFRP  ++ + ++L D GAV+
Sbjct: 62  DRERRDGRLRGPLHGIPLLLKDNINAAPMATSAGSLALQGFRPD-DAYLVRRLRDAGAVV 120

Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178
           LGK N+ E+A    N++                   +P GSS GS+ AVA  L + +IGT
Sbjct: 121 LGKTNLSEWANFRGNDSISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGT 180

Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238
           +T GSI  PA+  G VG+KPT G  SR GII  + S D AG + R+V D+A +L AIAG 
Sbjct: 181 ETDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAGR 240

Query: 239 DECDATCVNL---PVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294
           D+ D     +    V DY   LD Q ++G  +G+ +   L Y    +    +Q  + L+ 
Sbjct: 241 DDADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKY--RGMPPLIEQAATELRR 298

Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354
           AGA +V + LP+      A   +   E  + L RY            D++       S  
Sbjct: 299 AGAVVVPVELPNQGAWAEAERTLLLYEFKAGLERYFNTHRAPLRSLADLIAFN-QAHSKQ 357

Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--EQGVDVILTPTTPTS 412
                   +++     +     ++       R L   +  +A      +D ++ PTT  +
Sbjct: 358 ELGLFGQELLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAHQLDALVAPTTGVA 417

Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472
                + ++  G            A  +AG P+++VP    +  +P+GL  +G  + E  
Sbjct: 418 WPIRSEGDDFPGES--------YSAAAVAGYPSLTVPMGQID-GLPVGLLFMGTAWSEPK 468

Query: 473 LFSVGQIIEKEAGYFRPHKW 492
           L  +    E+     RP  +
Sbjct: 469 LIEMAYAYEQRTRARRPPHF 488

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Peptide amidase Pam
species: Stenotrophomonas maltophilia [TaxId: 40324]