RPSBLAST alignment of GI: 254780978 and SCOP domain: d1ocka_

Alignment

 Score =  194 bits (492), Expect = 2e-50
 Identities = 99/476 (20%), Positives = 182/476 (38%), Gaps = 69/476 (14%)

Query: 7   MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66
           +++++ + R+ + ++S    +     AIE    +++A++              DK     
Sbjct: 2   ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRH------------DKSARAQ 49

Query: 67  DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126
            +  L GI +GIKD   T  + T+  S I  G++P  ++ V   L   GA ++GK     
Sbjct: 50  ASGPLRGIAVGIKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTA 109

Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186
           FA                          +PGGSS GS+AAV   +   ++GT TGGS+ +
Sbjct: 110 FASR-----------DPTATLNPHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIR 158

Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246
           PA++ GT  IKP++     +G+  ++ +LD  G+      D A  L A+ G  E      
Sbjct: 159 PAAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIV- 217

Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306
                          +   +G+ ++     + P  ++  Q  I   + AGA +  I LP 
Sbjct: 218 -------------PAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASVQAIDLPE 264

Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366
             +     + I     +     ++                           +    ++  
Sbjct: 265 AVHEAWRIHPIIQDFEAHRALAWE----------------------FSEHHDEIAPMLRA 302

Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426
           +   +       Y  AR+I    +R+  E FE GVDV+LT + P +A             
Sbjct: 303 SLDATVGLTPKEYDEARRIGRRGRRELGEVFE-GVDVLLTYSAPGTAPAKALASTG---- 357

Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482
               +  +     + G P ++VP  L    +P+G+Q+I +   +    +    +E 
Sbjct: 358 ----DPRYNRLWTLMGNPCVNVP-VLKVGGLPIGVQVIARFGNDAHALATAWFLED 408

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Malonamidase E2
species: Bradyrhizobium japonicum [TaxId: 375]