HHsearch alignment for GI: 254780979 and conserved domain: PRK04028
>PRK04028 glutamyl-tRNA(Gln) amidotransferase subunit E; Validated.
Probab=100.00 E-value=0 Score=1152.57 Aligned_cols=447 Identities=32% Similarity=0.497 Sum_probs=409.0
Q ss_pred CCCCCEE---EEEEEEEEECCCCCCCCCCCCCCCC-C-------------------------------------CCCCCC
Q ss_conf 4780338---9899978886898655588424689-8-------------------------------------765206
Q gi|254780979|r 19 TGDWEVV---IGIEVHAQLSVVSKLFSGASVNFGA-E-------------------------------------PNTQVS 57 (500)
Q Consensus 19 ~~~~e~v---IGLEiH~qL~t~tKlFc~c~~~~~~-~-------------------------------------pNt~v~ 57 (500)
T Consensus 2 ~~~~e~~gl~IGLEiH~QL~T~tKlFc~c~t~~~~~~pn~~~~~~~~~~~~~lg~~d~aa~~e~~~~~~f~y~~~~~~~C 81 (631)
T PRK04028 2 KMDYEELGLKVGLEIHQQLDTKRKLFCRCPTELRDDEPHFEFERYLRPTQSELGEIDPAALEESKKGRKFIYEAYRDTTC 81 (631)
T ss_pred CCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98859969876689987748998737899986567886531000245431111323265554321133334458899857
Q ss_pred HH-HCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 13-02689888737899999999987782976244201311321237678882014454420153389997067777741
Q gi|254780979|r 58 FF-DAAMPGMLPILNGRCVQQAVMTGLGLNAHINKYSVFARKNYFYPDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQF 136 (500)
Q Consensus 58 ~~-~~g~PG~lP~lN~~av~~ai~~~~al~~~i~~~~~fdRK~YfYpDlpkgyQiTQ~~~Pi~~~G~l~~~~~~~~~~~~ 136 (500)
T Consensus 82 ~v~~~~~Pp~~~--N~~av~~ai~~~~alnc~I~~~~~f~RK~yfypd~pkgyQiTq~---i~~~G~le~~--------- 147 (631)
T PRK04028 82 LVELDEEPPHEL--NEEALEIALAVAKLLNMKPVDEIHVMRKIVIDGSNTSGFQRTAL---VALGGYIETS--------- 147 (631)
T ss_pred CCCCCCCCCCCC--CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE---ECCCCEEECC---------
T ss_conf 223678998777--99999999999998498136465003666668876631345635---5389679656---------
Q ss_pred EEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 03798423666520231001156787148866157861257630365277899999999999998642045676432201
Q gi|254780979|r 137 RTIEVGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEIVTKPDMRSSLEAKAFLTKLRSILRYLGTCDGNMEEGSM 216 (500)
Q Consensus 137 ~~~~v~I~~i~lEED~gk~~h~~~~~~slvD~NRaGvPLiEIVT~Pd~~s~~ea~~~~~~l~~ilr~~gisd~~meeGsl 216 (500)
T Consensus 148 -~~~V~I~rihLEEDagK~i~~~-~~~~~ydlNRaGvPLiEIVTePDi~s~eeA~~~~~~l~~ilr~~g~~~~~--~Gsl 223 (631)
T PRK04028 148 -GGKVGIETICLEEDAARKIEEK-GDYVVYSLDRLGIPLIEISTEPDIHSPEQAKEVALRIGMILRSTGKVKRG--LGTI 223 (631)
T ss_pred -CCEEEEEEEEECCCCCCCCCCC-CCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC--CCCE
T ss_conf -8434037998512457643468-98337744557985388843788899999999999999999986412456--7754
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH----------------------------------
Q ss_conf 1257543213766678862223540246599999999999999731----------------------------------
Q gi|254780979|r 217 RADVNVSVCRPGEAWGTRCEVKNVNSIRFLGLAIEYEARRQIAILE---------------------------------- 262 (500)
Q Consensus 217 R~DvNVSi~~~~~~~GtRvEIKNlnS~~~i~~AI~yEi~RQ~~ll~---------------------------------- 262 (500)
T Consensus 224 R~DvNVSvr-----~GtRvEIKNlnS~~~i~~AieyEi~RQ~~ll~~~~ei~~~g~~~~~~~~~~~d~t~~~~~t~s~ii 298 (631)
T PRK04028 224 RQDVNVSIA-----GGARVEIKGVQDLDLIPKVVEYEVQRQLNLLKIRDELRRRGASREEVVDEIVDVTELFKNTKSKVI 298 (631)
T ss_pred EEEEEEEEC-----CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHH
T ss_conf 566676414-----785256407754889999999999999999875777753144311134320013555313530788
Q ss_pred -----CCCC-----------------------------------------------------------------------
Q ss_conf -----3980-----------------------------------------------------------------------
Q gi|254780979|r 263 -----DGGH----------------------------------------------------------------------- 266 (500)
Q Consensus 263 -----~G~~----------------------------------------------------------------------- 266 (500)
T Consensus 299 ~~~l~~gg~v~a~~~~~~~g~lg~e~q~~rR~g~E~~d~~k~~g~~Gi~HsDElp~Ygi~~~e~~~~~~~l~~~~~Da~~ 378 (631)
T PRK04028 299 KRALKKGGKVLAVKLPGFKGLLGREIQPGRRLGTELADYAKWAGVGGIFHSDELPGYGITEEEVEALRDALGAGENDAVI 378 (631)
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf 76550487378775156344336566754200056766765415565334543434465266778888752467554135
Q ss_pred --------------------------CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf --------------------------034432337554336653035667777833277877312699999998853024
Q gi|254780979|r 267 --------------------------IRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEIDEDFIRAIKKQIPE 320 (500)
Q Consensus 267 --------------------------v~qETR~~d~~~~~T~~mR~KE~a~DYRyfPEPDLPpi~is~e~i~~i~~~lPe 320 (500)
T Consensus 379 l~~~~~~~~~~~~~~v~~R~~~~~~~vp~EtR~~~~d-g~T~~mR~k~ga~--RyfPEPDLPPi~Is~e~Ie~Ik~~LPE 455 (631)
T PRK04028 379 LVADEEEKAKKALEAVIERAKEALEGVPEETRKALPD-GTTRYLRPLPGAA--RMYPETDIPPIRITEELLEKIKKNLPE 455 (631)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC-CCEEECCCCCCCC--CCCCCCCCCCEECCHHHHHHHHHHCCC
T ss_conf 5327377788899999999987540685554156778-9874235567532--207798877464699999999971899
Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 836898864320268899988876411367898864-0243024577776545788764338740006489899999998
Q gi|254780979|r 321 LPDAKRERFIGEFGISLYDASVLVSDKSIADYFEKL-AVNRDKKIVANWVINDLLGVLNRSGKSIEDTPISPNQLGELID 399 (500)
Q Consensus 321 lP~~~~~rl~~~yGLs~~dA~~L~~~~~la~~FE~v-~~~~~pk~~Anwi~~el~~~ln~~~~~~~~~~i~p~~laeLi~ 399 (500)
T Consensus 456 LP~~kr~Rl~~eygLs~~dA~~L~~~~~l-~~FE~~v~~~~~pk~~An~l~~~l-~~L~~~~~~i~--~I~pe~La~Li~ 531 (631)
T PRK04028 456 LPEEKLERLVKEYGLSEELAEQLANSERL-DLFEELVKKGVKPTLIARTLVNTL-KELKREGVDIE--NITDEHIEEVFD 531 (631)
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHCCCHH-HHHHHHHHCCCCHHHHHHHHHHHH-HHHHHCCCCCC--CCCHHHHHHHHH
T ss_conf 99999999999709899999999747389-999999971699999999999999-99997689813--399999999999
Q ss_pred HHHCCCCCHHHHHHHHHHHHHC-CCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 8863873147899999999817-999889999639876189889999999999839998997527213226589999997
Q gi|254780979|r 400 LIIDGTISGKIAKDIFNILWEK-GGTPKEIVEELGLRQVTDLSAIEKVVDEVINSNPNNVARIATKPNLVSWFVGQVMKN 478 (500)
Q Consensus 400 li~~g~Is~~~aK~il~~l~~~-~~~p~~iie~~gL~~isD~~eL~~iv~eVI~~np~~V~~~kgk~ka~gfLvGqVMK~ 478 (500)
T Consensus 532 Li~~G~IS~~~aK~V~~~m~~~~g~~p~~Iiee~gL~qisd~-eLe~iV~eVI~eN~~~Vk~--gK~kaigfLvGQVMK~ 608 (631)
T PRK04028 532 LVSEGKIAKEAIEEILKALAENPGKSVEEAAEELGLTRLSEE-EVEKIIEEIVEENIDFVKE--KGMGAFGPLMGEVMAE 608 (631)
T ss_pred HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHH-HHHHHHHHHHHHCHHHHHH--CCCCCCHHHHHHHHHH
T ss_conf 998698538999999999985799899999997699768999-9999999999978999985--4423201099999998
Q ss_pred HCCCCCHHHHHHHHHHHHCC
Q ss_conf 28977889999999997078
Q gi|254780979|r 479 TGGKANPSIVQKMLKEKLGI 498 (500)
Q Consensus 479 tkGkAdpk~v~~lL~e~L~~ 498 (500)
T Consensus 609 tkGKAnPk~VnelLkekLke 628 (631)
T PRK04028 609 LRGKADGKIVSEILREKLKE 628 (631)
T ss_pred HCCCCCHHHHHHHHHHHHHH
T ss_conf 57997999999999999999