HHsearch alignment for GI: 254780979 and conserved domain: pfam02934
>pfam02934 GatB_N GatB/GatE catalytic domain. This domain is found in the GatB and GatE proteins.
Probab=100.00 E-value=0 Score=961.25 Aligned_cols=286 Identities=57% Similarity=0.924 Sum_probs=278.2
Q ss_pred CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEECCCEEC
Q ss_conf 33898999788868986555884246898765206130268988873789999999998778297624420131132123
Q gi|254780979|r 23 EVVIGIEVHAQLSVVSKLFSGASVNFGAEPNTQVSFFDAAMPGMLPILNGRCVQQAVMTGLGLNAHINKYSVFARKNYFY 102 (500)
Q Consensus 23 e~vIGLEiH~qL~t~tKlFc~c~~~~~~~pNt~v~~~~~g~PG~lP~lN~~av~~ai~~~~al~~~i~~~~~fdRK~YfY 102 (500)
T Consensus 1 e~vIGLEiH~qL~T~tKlFc~c~~~~~~~PNt~v~p~~lg~PG~LPvlN~~av~~Ai~~~laL~c~I~~~s~fdRK~YfY 80 (287)
T pfam02934 1 ELVIGLEIHVQLNTKTKLFCGCPTEFGAEPNTNVCPVCLGLPGALPVLNKEAVELAIKAGLALNCEINDESRFDRKNYFY 80 (287)
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCEEEEC
T ss_conf 98899999988179977668999867899756578043069878764699999999999998298636221761202676
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECC
Q ss_conf 76788820144544201533899970677777410379842366652023100115678714886615786125763036
Q gi|254780979|r 103 PDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQFRTIEVGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEIVTKP 182 (500)
Q Consensus 103 pDlpkgyQiTQ~~~Pi~~~G~l~~~~~~~~~~~~~~~~v~I~~i~lEED~gk~~h~~~~~~slvD~NRaGvPLiEIVT~P 182 (500)
T Consensus 81 pDlPkgYQITQ~~~Pi~~~G~l~i~~~~------~~k~i~I~rihlEEDagK~~h~~~~~~slvD~NRaGvPLiEIVTeP 154 (287)
T pfam02934 81 PDLPKGYQITQYDLPIATNGYLEIEVDG------EEKRIGIERIHLEEDAGKLIHEGGGDYSLVDLNRAGVPLIEIVTEP 154 (287)
T ss_pred CCCCCCCCEECCCCCEECCCEEEEECCC------CCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECC
T ss_conf 9888564300564677301389860289------6205714798870023424546899736884045798248998358
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5277899999999999998642045676432201125754321376-667886222354024659999999999999973
Q gi|254780979|r 183 DMRSSLEAKAFLTKLRSILRYLGTCDGNMEEGSMRADVNVSVCRPG-EAWGTRCEVKNVNSIRFLGLAIEYEARRQIAIL 261 (500)
Q Consensus 183 d~~s~~ea~~~~~~l~~ilr~~gisd~~meeGslR~DvNVSi~~~~-~~~GtRvEIKNlnS~~~i~~AI~yEi~RQ~~ll 261 (500)
T Consensus 155 d~~s~eeA~~~~~~L~~il~~lgisd~~me~GslR~DvNVSv~~~g~~~~g~rvEIKNlNS~~~v~~Ai~~Ei~RQ~~~l 234 (287)
T pfam02934 155 DIRSPEEARAYLKKLRQILRYLGVSDGNMEEGSLRCDANVSVRPKGSEEFGTRVEIKNLNSFRFVEKAIEYEIERQIELL 234 (287)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999999999999747555674556345420377535788765315886347679999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 13980034432337554336653035667777833277877312699999998
Q gi|254780979|r 262 EDGGHIRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEIDEDFIRAI 314 (500)
Q Consensus 262 ~~G~~v~qETR~~d~~~~~T~~mR~KE~a~DYRyfPEPDLPpi~is~e~i~~i 314 (500)
T Consensus 235 ~~G~~v~qETR~~d~~~~~T~~mR~Ke~a~DYRyfPePDLppi~i~~~~i~~i 287 (287)
T pfam02934 235 EEGGKVPQETRLWDEDKGETVSMRSKEGAADYRYFPEPDLPPIVISDEWIEEI 287 (287)
T ss_pred HCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHC
T ss_conf 85998432116797898958106268863365757899978767699999349