HHsearch alignment of GI: 254780979 and MMDB domain: 3h0l_B_1-296
>3h0l_B (B:1-296) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=100.00 E-value=0 Score=936.12 Aligned_cols=294 Identities=51% Similarity=0.892 Sum_probs=286.1
Q ss_pred CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEECC
Q ss_conf 47803389899978886898655588424689876520613026898887378999999999877829762442013113
Q gi|254780979|r 19 TGDWEVVIGIEVHAQLSVVSKLFSGASVNFGAEPNTQVSFFDAAMPGMLPILNGRCVQQAVMTGLGLNAHINKYSVFARK 98 (500)
Q Consensus 19 ~~~~e~vIGLEiH~qL~t~tKlFc~c~~~~~~~pNt~v~~~~~g~PG~lP~lN~~av~~ai~~~~al~~~i~~~~~fdRK 98 (500)
+.+|++||||||||||+|+|||||+|+++|+++|||+|||||+|+||+||+||++||++|+++|+||||+|+++++||||
T Consensus 2 ~~~~~~~iGLEiH~qL~t~tKlF~~c~~~~~~~pN~~v~~~~~~~PG~lP~lN~~av~~ai~~a~aLnc~i~~~~~FdRK 81 (296)
T 3h0l_B 2 NEKYEAVIGLEIHVQMDTKTKMFCGCKVEFGAEPNTNVCPVCLGMPGALPIVNKRAVEYAIRASLALNCEVHEESVFARK 81 (296)
T ss_dssp -CCEEEEEEEEEEEECCCSBCSSSSCBCCTTCCTTCSCCTTTTTCTTCCCCCBHHHHHHHHHHHHHTTCEECSEECEEEE
T ss_pred CCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 98851788899987828996757999987788874551751465999875358999999999999839872535368888
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEE
Q ss_conf 21237678882014454420153389997067777741037984236665202310011567871488661578612576
Q gi|254780979|r 99 NYFYPDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQFRTIEVGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEI 178 (500)
Q Consensus 99 ~YfYpDlpkgyQiTQ~~~Pi~~~G~l~~~~~~~~~~~~~~~~v~I~~i~lEED~gk~~h~~~~~~slvD~NRaGvPLiEI 178 (500)
|||||||||||||||++.|||.||+|++...++. .++|+|.||||||||||++|+ +++|+|||||||+|||||
T Consensus 82 ~YfY~DlPkgYQiTQ~~~Pi~~~G~i~i~~~~g~-----~k~i~I~~i~lEEDagk~~h~--~~~s~vD~NRaGvPLiEI 154 (296)
T 3h0l_B 82 HYFYPDLPKGYQISQYEKPLATNGWVELNLPNGE-----KKKVRIRRLHIEEDAGKNIHE--GDKTLVDLNRAGTPLMEI 154 (296)
T ss_dssp ECCCTTCTTSEEEEESSSCSEEEEEEEEECTTSC-----EEEEEEEEEEEEECCCEEEEE--TTEEEEECSSTTCEEEEE
T ss_pred EECCCCCCCHHHHCCCCCCCCCCCEEEEEECCCC-----EEEEEEEEEEEECCCCCCCCC--CCCEEEECCCCCCCEEEE
T ss_conf 6227999830001034255133555999825897-----347726789960136755668--996178324689853788
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 30365277899999999999998642045676432201125754321376-66788622235402465999999999999
Q gi|254780979|r 179 VTKPDMRSSLEAKAFLTKLRSILRYLGTCDGNMEEGSMRADVNVSVCRPG-EAWGTRCEVKNVNSIRFLGLAIEYEARRQ 257 (500)
Q Consensus 179 VT~Pd~~s~~ea~~~~~~l~~ilr~~gisd~~meeGslR~DvNVSi~~~~-~~~GtRvEIKNlnS~~~i~~AI~yEi~RQ 257 (500)
||+|||+||+||++|+++|+++|||+|+|||+||+|+|||||||||+++| .+||+||||||||||++|.+||+||+.||
T Consensus 155 VTePd~~s~~ea~~~~~~l~~ilr~~gv~~~~me~GslR~DvNVSi~~~g~~~~g~RvEIKNlnS~~~i~~aIe~E~~RQ 234 (296)
T 3h0l_B 155 VTEPDIRTPEEARLFLEKLRNIMRYAGVSKADMEKGQLRCDINVSIRPKGSKEFGTRVEIKNVNSFRFVQKALEYEIERQ 234 (296)
T ss_dssp EECTTBCSHHHHHHHHHHHHHHHHHHTSCCCCGGGTSEEEEEEEEEEETTCCSCCCCEEEECCCSHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 70577568999999999999999984767566656632356552557788766665364538746899999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99731398003443233755433665303566777783327787731269999999885302
Q gi|254780979|r 258 IAILEDGGHIRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEIDEDFIRAIKKQIP 319 (500)
Q Consensus 258 ~~ll~~G~~v~qETR~~d~~~~~T~~mR~KE~a~DYRyfPEPDLPpi~is~e~i~~i~~~lP 319 (500)
+++|+.|+.|.||||+||+.+++|++||+||++.||||||||||||+.|+++||++++.+||
T Consensus 235 ~~ll~~g~~i~~eTr~~d~~~~~T~~mR~KE~~~dYRy~pEpdLppi~i~~~~i~~i~~~lP 296 (296)
T 3h0l_B 235 INVVEEGGEVVQETRTFDPQTGKTYPMRTKEEAEDYRYFPDPDLVPLKVKKEWIEEIKKNMP 296 (296)
T ss_dssp HHHHHTTCCCCCCEEEEETTTTEEECCSCCCCCCCCCCEECTTSCCEECCHHHHHHHHHTCC
T ss_pred HHHHHCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 99998599543133014665334650445454444677777887773368999999998689