HHsearch alignment of GI: 254780979 and MMDB domain: 3h0l_B_297-478

>3h0l_B (B:297-478) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=100.00  E-value=1.4e-36  Score=289.48  Aligned_cols=178  Identities=44%  Similarity=0.796  Sum_probs=173.7

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             48368988643202688999888764113678988640-24302457777654578876433874000648989999999
Q gi|254780979|r  320 ELPDAKRERFIGEFGISLYDASVLVSDKSIADYFEKLA-VNRDKKIVANWVINDLLGVLNRSGKSIEDTPISPNQLGELI  398 (500)
Q Consensus       320 elP~~~~~rl~~~yGLs~~dA~~L~~~~~la~~FE~v~-~~~~pk~~Anwi~~el~~~ln~~~~~~~~~~i~p~~laeLi  398 (500)
                      |||+++++||+++||||.++|.+|++++.+++||+.+. ...+|+.++||+++++.+.+|+.+.++....++|++|++|+
T Consensus         1 ElP~~~~~rl~~~~gl~~~~a~~l~~~~~l~~~fe~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~~~~~~~~l~~l~   80 (182)
T 3h0l_B            1 ELPDQRFERLIKEYGLSEYEAGILVNHKEVGDFFEEAVRHFKEPKGIVNWLINDLLGLLRDKGISIEESPVKPEHLAELV   80 (182)
T ss_dssp             CCHHHHHHHHHHHTCCCHHHHHHHHHSHHHHHHHHHHHHHSCCHHHHHHHHHHTHHHHHHHHTCCGGGCSSCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHH
T ss_conf             98489999999983999889999873167788888887622561156656302677887664897775586999999999


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHH-CCCCCHHHHHHHHHH
Q ss_conf             8886387314789999999981799988999963987618988999999999983999899752-721322658999999
Q gi|254780979|r  399 DLIIDGTISGKIAKDIFNILWEKGGTPKEIVEELGLRQVTDLSAIEKVVDEVINSNPNNVARIA-TKPNLVSWFVGQVMK  477 (500)
Q Consensus       399 ~li~~g~Is~~~aK~il~~l~~~~~~p~~iie~~gL~~isD~~eL~~iv~eVI~~np~~V~~~k-gk~ka~gfLvGqVMK  477 (500)
                      .++++|+||...+|+++..++.++.+|.++|.++||.+++|+++|+.+|++||++||++|++|+ |+++++|||||||||
T Consensus        81 ~lv~~~~it~~~ak~~l~~~~~~~~~~~~~i~~~~l~~~~de~ei~~~v~~vi~~n~~~v~~~~~g~~k~~g~liG~vMk  160 (182)
T 3h0l_B           81 KLIKEKVISTKIGKEVIKEMVETGKTPSQIVEEKGLKQITDENQIKELVKKIFEKHPKEVERLKQGEEKLIGFFVGQVMR  160 (182)
T ss_dssp             HHHHTTSSCHHHHHHHHHHHHHHCCCHHHHHHHHCC--------------------------------------------
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             99863875277899999999966999999999769950588899999999999979899999977507678779999999


Q ss_pred             HHCCCCCHHHHHHHHHHHHC
Q ss_conf             72897788999999999707
Q gi|254780979|r  478 NTGGKANPSIVQKMLKEKLG  497 (500)
Q Consensus       478 ~tkGkAdpk~v~~lL~e~L~  497 (500)
                      +|+|||||+.|+++|+++|+
T Consensus       161 ~~~Gkad~~~v~~ll~e~L~  180 (182)
T 3h0l_B          161 ETRGKANPQVVNKVIRELVK  180 (182)
T ss_dssp             --------------------
T ss_pred             HHCCCCCHHHHHHHHHHHHH
T ss_conf             86798799999999999984