HHSEARCH alignment of GI: 254780979 and SCOP domain: d1zq1c1

Alignment

Probab=99.02  E-value=1.1e-10  Score=95.77  Aligned_cols=55  Identities=31%  Similarity=0.472  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHH
Q ss_conf             483689886432026889998887641136789886-40243024577776545788
Q gi|254780979|r  320 ELPDAKRERFIGEFGISLYDASVLVSDKSIADYFEK-LAVNRDKKIVANWVINDLLG  375 (500)
Q Consensus       320 elP~~~~~rl~~~yGLs~~dA~~L~~~~~la~~FE~-v~~~~~pk~~Anwi~~el~~  375 (500)
                      |||+++++||+++|||+++||.+|++++.++ |||+ +..+.+||.+||||+++|.|
T Consensus         1 ELP~~k~~Ry~~eygLs~~dA~~l~~~~~~~-~Fee~v~~~~~pklaAnwl~~~l~g   56 (56)
T d1zq1c1           1 ELPQAKVERYVKEYKLDRSLAQTLVDDERDE-LFEELVSMGVKPSLAASILVVVLKG   56 (56)
T ss_dssp             CCHHHHHHHHHTTTCCCHHHHHHHHHTSTHH-HHHHHHHTTCSTTHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHCCHHHH-HHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf             9879999999998397999999998775799-9999998099899989999998339

SCOP domain information

class: All alpha proteins
fold: GatB/YqeY motif
superfamily: GatB/YqeY motif
family: GatB/GatE C-terminal domain-like
domain: Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE, C-terminal domain
species: Pyrococcus abyssi [TaxId: 29292]