RPSBLAST alignment for GI: 254780979 and conserved domain: KOG2438

>gnl|CDD|37649 KOG2438, KOG2438, KOG2438, Glutamyl-tRNA amidotransferase subunit B [Translation, ribosomal structure and biogenesis]. Length = 505
 Score =  493 bits (1270), Expect = e-140
 Identities = 207/488 (42%), Positives = 304/488 (62%), Gaps = 12/488 (2%)

Query: 20  GDWEVVIGIEVHAQLSVVSKLFSGASVNFGAEPNTQVSFFDAAMPGMLPILNGRCVQQAV 79
             W  VIG+E+HAQL+ VSKLFSG+ VNFGA PNT VS+FDA++PG LP+LN   V+ AV
Sbjct: 21  RKWAAVIGLEIHAQLATVSKLFSGSKVNFGAPPNTSVSYFDASLPGTLPVLNREAVEFAV 80

Query: 80  MTGLGLNAHINKYSVFARKNYFYPDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQFRTI 139
              L LN  +N  S F RK+YFYPDLP GYQI+Q   PI   G + +S G D        
Sbjct: 81  KLSLALNCEVNNVSKFDRKHYFYPDLPAGYQITQQRIPIARNGFIPLSAGLDNVPD---K 137

Query: 140 EVGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEIVTKPDMRSSLEAKAFLTKLRS 199
            +GI +I LEQD GKS HD   + S +DLNR+GV L+EIVTKPD    +EA AF+ +L+ 
Sbjct: 138 TIGILQIQLEQDTGKSTHDDAPSRSLVDLNRAGVPLLEIVTKPDFSDGIEAAAFVKELQL 197

Query: 200 ILRYLGTCDGNMEEGSMRADVNVSVCRPGEAWGTRCEVKNVNSIRFLGLAIEYEARRQIA 259
           ILR+LG   GNMEEG++R DVN+S+   G   GTR E+KN+NSIR +  AI+YE +RQ+ 
Sbjct: 198 ILRHLGISSGNMEEGALRVDVNISIAPDGSELGTRVELKNLNSIRSISNAIDYEIQRQVE 257

Query: 260 ILEDGGHIRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEIDEDFIRAIKKQIP 319
           +L +GG I+ ETR +D     T S+R KE   DYR+  EP+L PL +   ++ ++++++P
Sbjct: 258 LLNNGGAIQNETRGWDSEGGRTVSMRDKETLQDYRFMPEPNLPPLILHGKYVDSVREELP 317

Query: 320 ELPDAKRERFIGEFGISLYDASVLVSDKSIADYFE------KLAVNRDKKIVANWVINDL 373
           ELPDA RE+ + ++G+S  DA  L ++  + ++++      K       K++  W+  + 
Sbjct: 318 ELPDATREKLVEQYGLSAKDAVTLANEVELLEFYKDSVRIIKYKAETTPKLITYWIKEEF 377

Query: 374 LGVLNRSGKSIEDTPISPNQLGELIDLIIDGTISGKIAKDIFNILWEKGG--TPKEIVEE 431
           LG L +   S   + ++P QL +L+ L+ + TIS   AK +   L +  G  T   ++EE
Sbjct: 378 LGYLRQIALSPNQSIVTPRQLADLLKLLSEETISALSAKQLLRHLLKNPGVMTVSILIEE 437

Query: 432 LGLRQVTDLSAIEKVVDEVINSNPNNVARIAT-KPNLVSWFVGQVMKNTGGKANPSIVQK 490
             L Q+ D + IE++V  V+  +P  V ++ + K   +   +G VMK++ G+ANP  ++K
Sbjct: 438 KRLWQIRDPAEIEELVRSVMEKHPKQVEQLRSGKTKSIKRLIGLVMKSSQGRANPKDLEK 497

Query: 491 MLKEKLGI 498
           +L+E L  
Sbjct: 498 ILEELLNR 505