BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780980|ref|YP_003065393.1| hypothetical protein
CLIBASIA_04405 [Candidatus Liberibacter asiaticus str. psy62]
(121 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780980|ref|YP_003065393.1| hypothetical protein CLIBASIA_04405 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040657|gb|ACT57453.1| hypothetical protein CLIBASIA_04405 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 121
Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER 60
MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER
Sbjct: 1 MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER 60
Query: 61 VEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPPS 120
VEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPPS
Sbjct: 61 VEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPPS 120
Query: 121 N 121
N
Sbjct: 121 N 121
>gi|254780556|ref|YP_003064969.1| hypothetical protein CLIBASIA_02215 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040233|gb|ACT57029.1| hypothetical protein CLIBASIA_02215 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 10/108 (9%)
Query: 1 MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER 60
M+AK L+ S TT +TI GC +V ED N+++ S +M+KEA ++ E H+LA+E
Sbjct: 1 MRAKTLLASTLVTTAITIIGCSLV----ED--NRIE--SLRMVKEAKMEVLEAHKLAKEY 52
Query: 61 VEAAEKRVKEVEERATAS--RKLSVDELANAFWDLSDEDKNAFTGNVK 106
VE A +RVKE EE++ A + L +D+L F +L +++ F ++
Sbjct: 53 VEQANQRVKEAEEQSNARLLKGLGMDDLVRYFMNLDSQNQAFFIDTIQ 100
>gi|327271882|ref|XP_003220716.1| PREDICTED: laminin subunit alpha-5-like [Anolis carolinensis]
Length = 3663
Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 27 RTEDLLNKLQ--KNSTQMIKEANFKISETHRLAQERVEAAEKRVKEVEERATASRKLSVD 84
+ EDLLN+LQ K++ M+++ + A++ A + V +EE+ +K ++D
Sbjct: 2571 KKEDLLNQLQSVKSTLDMVQDGTAGAIQN---AKDAASQANETVARMEEKLNNMQK-NLD 2626
Query: 85 ELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVP 118
E + DL +ED N G K V ++ T+P
Sbjct: 2627 EWKQQYGDLKNEDLNQAVGEAKDTVSSLES-TLP 2659
>gi|58259447|ref|XP_567136.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107537|ref|XP_777653.1| hypothetical protein CNBA7730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260347|gb|EAL23006.1| hypothetical protein CNBA7730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223273|gb|AAW41317.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1184
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 5 ILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAA 64
I TS + T + CD+ ++DL K Q ++A + + AQ+RV+AA
Sbjct: 254 IRHTSTYVTLRMNSALCDVAADVSKDLSVK------QRQRDAEVRKAGATNAAQKRVKAA 307
Query: 65 EKRVKEVEERATASRKLSVDELANAFWDL 93
E RVKEV+E RK +++EL +D+
Sbjct: 308 EDRVKEVQE-----RKQTLEELMQEIFDV 331
>gi|91788850|ref|YP_549802.1| multi-sensor signal transduction histidine kinase [Polaromonas sp.
JS666]
gi|91698075|gb|ABE44904.1| multi-sensor signal transduction histidine kinase [Polaromonas sp.
JS666]
Length = 1253
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 12 STTLLTIGGCDIVIG----RTEDLLN--KLQKNSTQMIKEAN---FKISETH-RLAQERV 61
+T L+ GC + + R E L + KL ++ Q+I E F+ ++ +LA R+
Sbjct: 33 ATALIVFSGCAVAVALFHLRNEALRSGEKLTQSLAQVIAEQTSRTFQAADQRLQLAASRL 92
Query: 62 EA--AEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAF---TGNVKQEV 109
+A AEKR+ E RA +L A A W L + + F TGN+ ++
Sbjct: 93 QALDAEKRLTEESVRALLREQLRGLPFARAIWVLDRQGRTVFDSDTGNIGTQL 145
>gi|321250385|ref|XP_003191789.1| hypothetical protein CGB_A9310C [Cryptococcus gattii WM276]
gi|317458256|gb|ADV20002.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1309
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 5 ILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAA 64
I TS + T + CD+ ++DL K Q ++A + + AQ+R++AA
Sbjct: 254 IRHTSTYMTLKINSALCDVAADVSKDLSVK------QRQRDAEVRKAGATNAAQKRMQAA 307
Query: 65 EKRVKEVEERATASRKLSVDELANAFWDL 93
E RVKEV+E RK +++EL +D+
Sbjct: 308 EDRVKEVQE-----RKQTLEELMQEIFDV 331
>gi|302682220|ref|XP_003030791.1| hypothetical protein SCHCODRAFT_257312 [Schizophyllum commune H4-8]
gi|300104483|gb|EFI95888.1| hypothetical protein SCHCODRAFT_257312 [Schizophyllum commune H4-8]
Length = 764
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 26 GRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKRVKEVEERATAS 78
GR E + +L++ S Q ++E+N ++ +T RL Q+ V AAE+RV + E RA A+
Sbjct: 519 GRREVAIRQLEE-SNQRLEESNHQLEDTVRLLQQSVAAAEERVVKAETRALAA 570
>gi|120602938|ref|YP_967338.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
vulgaris DP4]
gi|120563167|gb|ABM28911.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
vulgaris DP4]
Length = 1085
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 55 RLAQERVEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTG 103
+LA+E++ +E+R+KE+ E + +L +EL +F + DK A G
Sbjct: 786 KLAEEKLRHSEERLKELNESLESQVRLRTEELERSFESVRQADKMASLG 834
>gi|46579568|ref|YP_010376.1| sensory box histidine kinase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448983|gb|AAS95635.1| sensory box histidine kinase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233379|gb|ADP86233.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
vulgaris RCH1]
Length = 1085
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 55 RLAQERVEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTG 103
+LA+E++ +E+R+KE+ E + +L +EL +F + DK A G
Sbjct: 786 KLAEEKLRHSEERLKELNESLESQVRLRTEELERSFESVRQADKMASLG 834
>gi|227824806|ref|ZP_03989638.1| formiminotetrahydrofolate cyclodeaminase [Acidaminococcus sp. D21]
gi|226905305|gb|EEH91223.1| formiminotetrahydrofolate cyclodeaminase [Acidaminococcus sp. D21]
Length = 206
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 56 LAQERVEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAF 101
L +E+ A EK +KEV E+A + L N F L DED NAF
Sbjct: 47 LGKEKYAAVEKEMKEVAEKAAS--------LKNQFLALIDEDSNAF 84
>gi|159486149|ref|XP_001701106.1| hypothetical protein CHLREDRAFT_194202 [Chlamydomonas reinhardtii]
gi|158272000|gb|EDO97808.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1430
Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 31 LLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKRVKEVEERATASRK 80
+L KL K + ++EA + + A++RVE AE+RV+E E+R + +
Sbjct: 67 ILQKLVKAVKEDVEEAQQEAQQRVEKAEQRVEKAEQRVEEAEQRVEKAEQ 116
Searching..................................................done
Results from round 2
CONVERGED!
>gi|254780980|ref|YP_003065393.1| hypothetical protein CLIBASIA_04405 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040657|gb|ACT57453.1| hypothetical protein CLIBASIA_04405 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 121
Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats.
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER 60
MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER
Sbjct: 1 MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER 60
Query: 61 VEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPPS 120
VEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPPS
Sbjct: 61 VEAAEKRVKEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPPS 120
Query: 121 N 121
N
Sbjct: 121 N 121
>gi|254780556|ref|YP_003064969.1| hypothetical protein CLIBASIA_02215 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040233|gb|ACT57029.1| hypothetical protein CLIBASIA_02215 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 1 MKAKILMTSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQER 60
M+AK L+ S TT +TI GC +V ED N+++ S +M+KEA ++ E H+LA+E
Sbjct: 1 MRAKTLLASTLVTTAITIIGCSLV----ED--NRIE--SLRMVKEAKMEVLEAHKLAKEY 52
Query: 61 VEAAEKRVKEVEERATAS--RKLSVDELANAFWDLSDEDKNAFTGNVKQE 108
VE A +RVKE EE++ A + L +D+L F +L +++ F ++ +
Sbjct: 53 VEQANQRVKEAEEQSNARLLKGLGMDDLVRYFMNLDSQNQAFFIDTIQNK 102
>gi|75911009|ref|YP_325305.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
gi|75704734|gb|ABA24410.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
Length = 1477
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 43 IKEANFKISETHRLAQERVEAAEKRVKEV-------EERATASRKLSVDELANAFWDLSD 95
+ +AN K++ T + A+E + A +RVKE +E A K + D++ A +L
Sbjct: 496 VNDANVKVANTQKEAKELTDKANQRVKEANIQVANTKEEAKNRTKKADDDVRLALENLGK 555
Query: 96 EDKNAFTG 103
K A
Sbjct: 556 ITKQAKID 563
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 27 RTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKRVKEVEERATASRKLS---- 82
R D ++ + S ++ K+ + E RLA+E E A + + E E+ A ++
Sbjct: 419 RLSDEDDRFLRESREVEKQDIDRKLEAERLARETAEQANQILLEAEQTAKGKVRVGSIIL 478
Query: 83 -----VDELANAFWDLSDEDKNAFTGNVKQE 108
V +A+ + +S D N N ++E
Sbjct: 479 AGTLVVAGVASVWAGISVNDANVKVANTQKE 509
>gi|159486149|ref|XP_001701106.1| hypothetical protein CHLREDRAFT_194202 [Chlamydomonas reinhardtii]
gi|158272000|gb|EDO97808.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1430
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 41 QMIKEANFKISETHRLAQERVEAAEKRVKEVEER 74
+++K + E + AQ+RVE AE+RV++ E+R
Sbjct: 70 KLVKAVKEDVEEAQQEAQQRVEKAEQRVEKAEQR 103
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 31 LLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKRVKEVEER 74
+L KL K + ++EA + + A++RVE AE+RV+E E+R
Sbjct: 67 ILQKLVKAVKEDVEEAQQEAQQRVEKAEQRVEKAEQRVEEAEQR 110
>gi|288922780|ref|ZP_06416949.1| hypothetical protein FrEUN1fDRAFT_6647 [Frankia sp. EUN1f]
gi|288345893|gb|EFC80253.1| hypothetical protein FrEUN1fDRAFT_6647 [Frankia sp. EUN1f]
Length = 674
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 14 TLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKRVKEVEE 73
T + G D V+ E ++Q+++ ++ E + R A VE AE+ ++ E
Sbjct: 267 TAKGVDGSDEVVAAQE----RVQESAAAIV-ETQLDGQRSVRDALHAVEQAERSLQSARE 321
Query: 74 RATASRKLSVDELANAFWDLSDEDKNA 100
++ AS VD A+A DL + +
Sbjct: 322 QSAASAAGGVDAYADALKDLPAKTQAF 348
>gi|255943494|ref|XP_002562515.1| Pc19g00220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587249|emb|CAP79438.1| Pc19g00220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 566
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 23 IVIGRTEDLLNKLQKNST---QMIKEANFKI--SETHRLAQERVEAAEKRVKEVEERATA 77
I+ G ++ L+ + NS + KE I H ++ A + +KE EE +
Sbjct: 484 IIKGASKSPLSSIAGNSRVHRRCTKETKLDIGNDSAHARIRDYWLRANQALKEKEEASGG 543
Query: 78 SRKLSVDELANAFWDLSD 95
L VD+ + ++
Sbjct: 544 RDYLDVDDEVFKYVNIDS 561
>gi|58259447|ref|XP_567136.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107537|ref|XP_777653.1| hypothetical protein CNBA7730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260347|gb|EAL23006.1| hypothetical protein CNBA7730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223273|gb|AAW41317.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1184
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 8 TSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKR 67
TS + T + CD+ ++DL K Q ++A + + AQ+RV+AAE R
Sbjct: 257 TSTYVTLRMNSALCDVAADVSKDLSVK------QRQRDAEVRKAGATNAAQKRVKAAEDR 310
Query: 68 VKEVEERATASRKL 81
VKEV+ER +L
Sbjct: 311 VKEVQERKQTLEEL 324
>gi|72389040|ref|XP_844815.1| 65 kDa invariant surface glycoprotein [Trypanosoma brucei TREU927]
gi|62176336|gb|AAX70448.1| 65 kDa invariant surface glycoprotein, putative [Trypanosoma
brucei]
gi|70801349|gb|AAZ11256.1| 65 kDa invariant surface glycoprotein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 435
Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 28 TEDLLNKLQKNSTQMIKE----ANFKISETHRLAQERVEAAEKRVKEVEERATASRKLSV 83
+ + +KL T+ +KE A K+SE A+E E A KR +EV E A +R +
Sbjct: 84 SNNGYSKLSDADTKKVKEIYEKAKGKVSEQLPKAKEFGEEAGKRHQEVTEAAKRARGWGL 143
Query: 84 DE 85
D+
Sbjct: 144 DD 145
>gi|52080071|ref|YP_078862.1| inositol monophosphatase SuhB [Bacillus licheniformis ATCC 14580]
gi|52785445|ref|YP_091274.1| YktC [Bacillus licheniformis ATCC 14580]
gi|319646154|ref|ZP_08000384.1| YktC protein [Bacillus sp. BT1B_CT2]
gi|52003282|gb|AAU23224.1| Inositol monophosphatase SuhB [Bacillus licheniformis ATCC 14580]
gi|52347947|gb|AAU40581.1| YktC [Bacillus licheniformis ATCC 14580]
gi|317391904|gb|EFV72701.1| YktC protein [Bacillus sp. BT1B_CT2]
Length = 264
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 52 ETHRLAQERVEAAEKRVKEV-EERATASRKLSVDELANAFWDLSDEDKNAFTGNVK 106
E RLA+ V+ A +R+K+ +E+ T K + ++L ++ E + F ++
Sbjct: 6 EIDRLAKSWVKEAGQRIKQSMKEKMTIETKSNPNDLVT---NIDKETERFFIEKIQ 58
>gi|261328538|emb|CBH11515.1| 64 kDa invariant surface glycoprotein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 435
Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 28 TEDLLNKLQKNSTQMIKE----ANFKISETHRLAQERVEAAEKRVKEVEERATASRKLSV 83
+ + +KL T+ +KE A K+SE A+E E A KR +EV E A +R +
Sbjct: 84 SNNGYSKLSDADTKKVKEIYEKAKGKVSEQLPKAKEFGEEAGKRHQEVTEAAKRARGWGL 143
Query: 84 DE 85
D+
Sbjct: 144 DD 145
>gi|321250385|ref|XP_003191789.1| hypothetical protein CGB_A9310C [Cryptococcus gattii WM276]
gi|317458256|gb|ADV20002.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1309
Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 8 TSAFSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEKR 67
TS + T + CD+ ++DL K Q ++A + + AQ+R++AAE R
Sbjct: 257 TSTYMTLKINSALCDVAADVSKDLSVK------QRQRDAEVRKAGATNAAQKRMQAAEDR 310
Query: 68 VKEVEERATASRKL 81
VKEV+ER +L
Sbjct: 311 VKEVQERKQTLEEL 324
>gi|261328521|emb|CBH11498.1| 65 kDa invariant surface glycoprotein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 431
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 28 TEDLLNKLQKNSTQMIKE----ANFKISETHRLAQERVEAAEKRVKEVEERATASRKLSV 83
+ D +KL T+ +K+ A K+SE A+E E A KR + V E A +R +
Sbjct: 84 SNDGYSKLSDADTKKVKDIYEKAKGKVSEQLPKAKEFGEEAGKRCQSVTEAAKKARGWGL 143
Query: 84 DE 85
D+
Sbjct: 144 DD 145
>gi|224075467|ref|XP_002304646.1| predicted protein [Populus trichocarpa]
gi|222842078|gb|EEE79625.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 22 DIVIGRTEDLLNKLQKNSTQ----MIKEANFKISETHRLAQERVEAAEKRVKEVEERATA 77
++V ++D ++ + ++ + M++E N I E RL +ER + A+ RVKE+E++ A
Sbjct: 194 EVVNFNSKDTGDQHEASALRDELDMLQEENGNILEKLRLEEERCKEADARVKELEKQVAA 253
>gi|261328080|emb|CBH11057.1| 65 kDa invariant surface glycoprotein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 432
Score = 33.9 bits (76), Expect = 6.4, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 28 TEDLLNKLQKNSTQMIKE----ANFKISETHRLAQERVEAAEKRVKEVEERATASRKLSV 83
+ + +KL T+ +KE A K+SE A+E E A KR +EV E A +R +
Sbjct: 84 SNNGYSKLSDADTKKVKEIYEKAKGKVSEQLPKAKEFGEEAGKRHQEVTEAAKRARGWGL 143
Query: 84 DE 85
D+
Sbjct: 144 DD 145
>gi|270009401|gb|EFA05849.1| hypothetical protein TcasGA2_TC008640 [Tribolium castaneum]
Length = 4573
Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 11 FSTTLLTIGGCDIVIGRTEDLLNKLQKNSTQMIKEANFKISETHRLAQERVEAAEK--RV 68
++T + G V+ E LN+ + + ++I + +E ++A+E+ A+E+ +V
Sbjct: 3163 LASTSEEVDGLKEVLAVQEVELNEKNEAAGKLIAVLS---AENEKVAKEQAIASEEEAKV 3219
Query: 69 KEVEERATASRKLSVDELANAFWDLSDEDKNAFTGNVKQEVCKVKKITVPP 119
K +EE + +K+ D+LA A L + T N K + ++K T PP
Sbjct: 3220 KLIEEDVSVKQKICADDLAKAEPALIAAQQALNTLN-KNNLTELKSFTQPP 3269
>gi|255948250|ref|XP_002564892.1| Pc22g08800 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591909|emb|CAP98168.1| Pc22g08800 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 481
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 23 IVIGRTEDLLNKLQKNST---QMIKEANFKI--SETHRLAQERVEAAEKRVKEVEERATA 77
I+ G ++ L+ + NS + KE I H ++ A + +KE EE +
Sbjct: 399 IIKGASKSPLSSIAGNSRVHRRCTKETKLDIGNESAHARIRDYWLRANQALKEKEEASGG 458
Query: 78 SRKLSVDELANAFWDLSD 95
L V++ + ++
Sbjct: 459 RDYLDVEDEVFKYVNIDS 476
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.129 0.322
Lambda K H
0.267 0.0392 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,653,615,044
Number of Sequences: 14124377
Number of extensions: 49592727
Number of successful extensions: 293169
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 292829
Number of HSP's gapped (non-prelim): 659
length of query: 121
length of database: 4,842,793,630
effective HSP length: 88
effective length of query: 33
effective length of database: 3,599,848,454
effective search space: 118794998982
effective search space used: 118794998982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.1 bits)
S2: 75 (33.6 bits)