HHsearch alignment for GI: 254780982 and conserved domain: COG1280
>COG1280 RhtB Putative threonine efflux protein [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=257.05 Aligned_cols=202 Identities=27% Similarity=0.496 Sum_probs=182.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHH
Q ss_conf 998999999999999994899479999999983102889999999997766999999997775-5307478886768999
Q gi|254780982|r 1 MTLETWIHFLIFTLIITSAPGPGNILTINHALQHGWRPNKILILGQETAVFIIMLSITMGTKF-LSQLAYTMLIIKFLGV 79 (202)
Q Consensus 1 M~~~~~l~~~~~~~~~~~~PGP~~~~~i~~~~~~G~~~~~~~~~G~~~g~~~~~~~~~~g~~~-l~~~~~~~~~l~~~G~ 79 (202)
T Consensus 1 m~~~~~l~~~~~~~~~~~~PGP~~~~v~~~~~~~G~~~g~~~~~G~~~G~~~~~~l~~~Gl~all~~~~~~f~~lk~~Ga 80 (208)
T COG1280 1 MMLTNLLAFLLAALVLAATPGPDNLLVLARSLSRGRRAGLATALGIALGDLVHMLLAALGLAALLATSPALFTVLKLAGA 80 (208)
T ss_pred CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 95899999999999996598916999999999857899999999999999999999999999999972999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCH--HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHH
Q ss_conf 9999999997412467787101356788--89999878986327425788786667652477333-99999999999999
Q gi|254780982|r 80 AWLIYSAWSAWYSPFNDLPLGEIPLSSK--SKLFVKGFITDITNGKAWAFFMAMVPAYLNMNHYI-LPQSLILSLTMVSV 156 (202)
Q Consensus 80 ~yL~~lg~~~~~~~~~~~~~~~~~~~~~--~~~f~~G~~v~l~NPka~~f~~~~~~~fi~~~~~~-~~~~~~l~~~~~~~ 156 (202)
T Consensus 81 aYL~ylg~~~lra~~~~~~~~~~~~~~~~~~~~f~~G~l~~l~NPK~~lf~la~~pqfv~~~~~~~~~~~~~l~~~~~~~ 160 (208)
T COG1280 81 AYLLYLGWKALRAGGAALAEEAAGAPSSSRRKAFRRGLLVNLLNPKAILFFLAFLPQFVDPGAGLVLLQALILGLVFILV 160 (208)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999998576645555444444541156999999998359199999999999981788842799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999999996051389999999999999999999609
Q gi|254780982|r 157 DAMVLMTFSLICSKLRTLFSSSKFVKIQNRVSAVVFLLLALRIVAN 202 (202)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~in~i~g~~li~~ai~l~~s 202 (202)
T Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~G~~li~~g~~l~~~ 206 (208)
T COG1280 161 GFVVLALYALLAARLRRLLRRPRASRIINRLFGVLLIGFGVKLALS 206 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999998444599999999999999999999851