HHsearch alignment for GI: 254780982 and conserved domain: PRK10520
>PRK10520 rhtB homoserine/homoserine lactone efflux protein; Provisional.
Probab=100.00 E-value=0 Score=290.78 Aligned_cols=202 Identities=27% Similarity=0.465 Sum_probs=191.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHH
Q ss_conf 9989999999999999948994799999999831028899999999977669999999977755-307478886768999
Q gi|254780982|r 1 MTLETWIHFLIFTLIITSAPGPGNILTINHALQHGWRPNKILILGQETAVFIIMLSITMGTKFL-SQLAYTMLIIKFLGV 79 (202)
Q Consensus 1 M~~~~~l~~~~~~~~~~~~PGP~~~~~i~~~~~~G~~~~~~~~~G~~~g~~~~~~~~~~g~~~l-~~~~~~~~~l~~~G~ 79 (202)
T Consensus 1 M~l~~~l~f~~~~~~~~itPGP~~~~vi~~~~~~G~r~~~~~~~G~~~G~~~~~~la~~Gl~~l~~~~p~~f~~lk~~Ga 80 (205)
T PRK10520 1 MTLEWWLAYLLTSIILSLSPGSGAINTMSTSLSHGYRGAVASIAGLQTGLAIHIVLVGVGLGALFSQSLLAFEVLKWAGA 80 (205)
T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999996298688999999998858898999999999999999999999999999978999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999974124677871013567888999987898632742578878666765247733399999999999999999
Q gi|254780982|r 80 AWLIYSAWSAWYSPFNDLPLGEIPLSSKSKLFVKGFITDITNGKAWAFFMAMVPAYLNMNHYILPQSLILSLTMVSVDAM 159 (202)
Q Consensus 80 ~yL~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~v~l~NPka~~f~~~~~~~fi~~~~~~~~~~~~l~~~~~~~~~~ 159 (202)
T Consensus 81 ~YLi~Lg~~~~r~~~~~~~~~~~~~~~~~~~f~~G~l~~l~NPKa~~Ff~a~~pqFi~~~~~~~~q~~~l~~~~~~~~~~ 160 (205)
T PRK10520 81 AYLIWLGIQQWRAAGAIDLHTLASTQSRRKLFKRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYLVLGVTTVVVDII 160 (205)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998525667755456687666899999999925919999999998777189852499999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999996051389999999999999999999609
Q gi|254780982|r 160 VLMTFSLICSKLRTLFSSSKFVKIQNRVSAVVFLLLALRIVAN 202 (202)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~in~i~g~~li~~ai~l~~s 202 (202)
T Consensus 161 ~~~~~a~~~~~~~~~l~~~~~~~~~nrv~g~~li~~g~~La~~ 203 (205)
T PRK10520 161 VMIGYATLAQRIARWIKGPKQMKALNKIFGSLFMLVGALLASA 203 (205)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999998594999999999999999999999860