HHsearch alignment for GI: 254780982 and conserved domain: pfam02683
>pfam02683 DsbD Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.
Probab=98.52 E-value=3e-05 Score=43.82 Aligned_cols=160 Identities=10% Similarity=0.064 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCCCCCCCCCCCCHHH
Q ss_conf 88999999999776699999999777553074788867689999999999997412-------46778710135678889
Q gi|254780982|r 37 RPNKILILGQETAVFIIMLSITMGTKFLSQLAYTMLIIKFLGVAWLIYSAWSAWYS-------PFNDLPLGEIPLSSKSK 109 (202)
Q Consensus 37 ~~~~~~~~G~~~g~~~~~~~~~~g~~~l~~~~~~~~~l~~~G~~yL~~lg~~~~~~-------~~~~~~~~~~~~~~~~~ 109 (202)
T Consensus 39 ~~~~~f~lG~~~~f~~lG~~~~~~g~~~~---~~~~~~~~~~g~~~il~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 115 (206)
T pfam02683 39 LKALLFVLGLSIVFLSLGYGAAFLGGLFR---DYLGYLRVIAGIIVILMGLHFLGVFPIGFLRKLRLGHKKLKVEGPMLG 115 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99999999999999999999999999999---989999999999999999999999857776556666651266785067
Q ss_pred HHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99987898632-74257887866676524773339999999999999999999999999999999960513899999999
Q gi|254780982|r 110 LFVKGFITDIT-NGKAWAFFMAMVPAYLNMNHYILPQSLILSLTMVSVDAMVLMTFSLICSKLRTLFSSSKFVKIQNRVS 188 (202)
Q Consensus 110 ~f~~G~~v~l~-NPka~~f~~~~~~~fi~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~i~ 188 (202)
T Consensus 116 ~Fl~G~~~~l~~~PC~~P~l~~iL~~aa~~-g~~~~g~~~l~~y~lG~~-lP~ll~~~~~~~l~~~~~~~~~~~~v~~v~ 193 (206)
T pfam02683 116 AFLLGMLFALGWTPCIGPILASVLALAASS-GSLLLAALLLVVYVLGLG-IPFLLASLFAGSLLFLRWLRKNSRWIRIAS 193 (206)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999873545357999999999848-968999999999999999-999999999999987577789999999999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999999960
Q gi|254780982|r 189 AVVFLLLALRIVA 201 (202)
Q Consensus 189 g~~li~~ai~l~~ 201 (202)
T Consensus 194 G~~li~~gi~~l~ 206 (206)
T pfam02683 194 GVLLILIGILLLL 206 (206)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999979