BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780988|ref|YP_003065401.1| hypothetical protein
CLIBASIA_04445 [Candidatus Liberibacter asiaticus str. psy62]
(151 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780988|ref|YP_003065401.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040665|gb|ACT57461.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 151
Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats.
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE 60
MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE
Sbjct: 1 MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE 60
Query: 61 TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP 120
TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP
Sbjct: 61 TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP 120
Query: 121 LTLLAPFTQDIIACILGFWFTDTIVQRRKGV 151
LTLLAPFTQDIIACILGFWFTDTIVQRRKGV
Sbjct: 121 LTLLAPFTQDIIACILGFWFTDTIVQRRKGV 151
>gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040876|gb|ACT57672.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120664|gb|ADV02487.1| hypothetical protein SC1_gp005 [Liberibacter phage SC1]
gi|317120808|gb|ADV02629.1| hypothetical protein SC1_gp005 [Candidatus Liberibacter asiaticus]
Length = 157
Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats.
Identities = 79/158 (50%), Positives = 114/158 (72%), Gaps = 15/158 (9%)
Query: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALE 58
SFL G + RF ++F+PS F +++ EY+ K++SIE+D+L+LE+AK S+TQ+DL ++
Sbjct: 4 SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63
Query: 59 S-------ETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
+ + P+RLAR++ Q + + K + F ALIRP TT FWII+YPLL+WW V
Sbjct: 64 AGIEELKIDKPIRLARIEAQ----KVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV 119
Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
++G DPLTLL+PFTQ+IIACILGFW+TD IVQ++K
Sbjct: 120 KEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
>gi|315121924|ref|YP_004062413.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495326|gb|ADR51925.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 158
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/159 (49%), Positives = 112/159 (70%), Gaps = 15/159 (9%)
Query: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALE 58
SFL G I RF ++FVPS+F + + EY+M+++SIE+D+++LE KI S+TQ+DL ++
Sbjct: 4 SFLAGGIFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTKINSSTQLDLAEIK 63
Query: 59 -------SETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
+ P+RLAR++ Q + + K + NALIRP TTLFWII+YPLL+WW V
Sbjct: 64 YGIEELKVDKPIRLARIKAQ----KVKSGIKWIDGVNALIRPLTTLFWIIVYPLLVWWSV 119
Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
++GY K PL +L F Q+IIACILGFW+TD IVQ+R+G
Sbjct: 120 KEGYFDKSPLAVLTLFEQEIIACILGFWYTDKIVQKRRG 158
>gi|315122886|ref|YP_004063375.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496288|gb|ADR52887.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 158
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/159 (47%), Positives = 113/159 (71%), Gaps = 15/159 (9%)
Query: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK--- 55
SFL G + RF ++FVPS+F + + EY+M+++SIE+D+++LE +I S+TQ+DL
Sbjct: 4 SFLAGGLFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTRINSSTQLDLADIK 63
Query: 56 ----ALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
L+ + P+RLAR++ Q + + K + N LIRP TTLFWII+YPLL+WW V
Sbjct: 64 YAIEELKVDQPIRLARIKAQ----KVKSGVKWIDGLNTLIRPLTTLFWIIVYPLLVWWSV 119
Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
++G + PL++L+PF Q+IIACILGFW+TD IVQ+++G
Sbjct: 120 KEGIFDRSPLSILSPFEQEIIACILGFWYTDKIVQKKRG 158
>gi|317120748|gb|ADV02570.1| hypothetical protein SC2_gp250 [Liberibacter phage SC2]
gi|317120762|gb|ADV02583.1| hypothetical protein SC2_gp250 [Candidatus Liberibacter asiaticus]
Length = 157
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/158 (46%), Positives = 111/158 (70%), Gaps = 15/158 (9%)
Query: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK--- 55
SFL G + RF ++F+PS F +++ EY+ K++SIE+D+ +LE AKI S+ Q+DL
Sbjct: 4 SFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSIEYDKWKLETAKIDSSLQLDLADIK 63
Query: 56 ----ALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
L+++ P++LAR++ Q + K + FN L+RP TTLFWII+YP+++WW V
Sbjct: 64 YGIEELKADKPIKLARIKAQ----NIKSGVKWIDSFNTLVRPLTTLFWIIVYPMMVWWSV 119
Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
++G K PL++L+PF Q+IIACILGFWFTD IVQ+R+
Sbjct: 120 KEGIFDKSPLSILSPFEQEIIACILGFWFTDKIVQKRR 157
>gi|317120705|gb|ADV02527.1| hypothetical protein SC2_gp005 [Liberibacter phage SC2]
gi|317120766|gb|ADV02587.1| hypothetical protein SC2_gp005 [Candidatus Liberibacter asiaticus]
Length = 158
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 76/159 (47%), Positives = 119/159 (74%), Gaps = 15/159 (9%)
Query: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALE 58
SFL G + RF ++F+PS F +++ EY+ K++S+E++++++E+AKI ++TQV+L+ ++
Sbjct: 4 SFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSLEYNKMQIELAKINTSTQVNLEEIK 63
Query: 59 -------SETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
++ P+RLAR+++Q + + K + FNALIRP TTLFWI++YPLL+WW V
Sbjct: 64 YGIEELKADKPIRLARVKSQ----NVKIDIKWINGFNALIRPLTTLFWIVVYPLLVWWSV 119
Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
++ + DPLTLL+PFTQ+IIACILGFW+TD IVQ+R G
Sbjct: 120 KERMFSIDPLTLLSPFTQEIIACILGFWYTDKIVQKRWG 158
>gi|315122344|ref|YP_004062833.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495746|gb|ADR52345.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 125
Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 15/130 (11%)
Query: 29 MKEKSIEHDRLRLEIAKIQSTTQVDLK-------ALESETPVRLARLQNQANEDQFERES 81
M+++SIE+D+ +LE+A+ +TQ+DL L+ + P+RLAR++ Q +F+
Sbjct: 1 MQKQSIEYDKTKLELAR--GSTQLDLADIKYAIEELKVDQPIRLARIKAQ----KFKSGI 54
Query: 82 KAMIFFNALIRPFTTLFWIILYPLLIWW--GVEKGYLTKDPLTLLAPFTQDIIACILGFW 139
K + FNALIRP TT FWII+YPLL+W V++G + PL++L+PF QDIIACILGFW
Sbjct: 55 KWIDGFNALIRPLTTFFWIIIYPLLVWGIVCVKEGVFDRSPLSILSPFEQDIIACILGFW 114
Query: 140 FTDTIVQRRK 149
+TD IVQ+++
Sbjct: 115 YTDKIVQKKR 124
>gi|315122566|ref|YP_004063055.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495968|gb|ADR52567.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 130
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 95/134 (70%), Gaps = 18/134 (13%)
Query: 29 MKEKSIEHDRLRLEIAKIQSTTQVDLK-------ALESETPVRLARLQNQANEDQFERES 81
M+++SIE+++++LE +IQS+TQ+DL L+ + P+RLAR++ Q Q +
Sbjct: 1 MQKRSIEYEKMKLEQTRIQSSTQLDLADIKLGIEELKVDQPIRLARIKAQ----QVKSGI 56
Query: 82 KAMIFFNALI----RPFTTLFWIILYPLLIWW--GVEKGYLTKDPLTLLAPFTQDIIACI 135
+ + FNALI RP TTLFWII +PLL+WW GV++G + PL++L+PF QDIIACI
Sbjct: 57 QWIDAFNALINALIRPLTTLFWII-FPLLVWWSMGVKEGIFDRSPLSILSPFEQDIIACI 115
Query: 136 LGFWFTDTIVQRRK 149
LGFW+TD IVQ+++
Sbjct: 116 LGFWYTDKIVQKKR 129
>gi|315122770|ref|YP_004063259.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496172|gb|ADR52771.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 124
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 87/125 (69%), Gaps = 15/125 (12%)
Query: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK--- 55
SFL G + RF ++F+PS+F + + EY+M+++SIE+D+++LE+A+I S+TQ+DL
Sbjct: 4 SFLVGEVFRFALRFIPSVFEKIADGVLEYLMQKQSIEYDKMKLELARINSSTQLDLADIK 63
Query: 56 ----ALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
L+++ +RLAR++ Q + + + + FNA +RP T+LFWII+YPLL+WW V
Sbjct: 64 LEIEELKADQLIRLARIKAQ----KVKSGIQWIDGFNAFVRPLTSLFWIIVYPLLVWWSV 119
Query: 112 EKGYL 116
+ G+L
Sbjct: 120 KGGHL 124
>gi|315122303|ref|YP_004062792.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495705|gb|ADR52304.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 115
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 18 PSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK-------ALESETPVRLA 66
PS+F + + EY+M+++SIE+D++ LE+ +I S+TQ+DL L+ + +RLA
Sbjct: 14 PSVFEKIADGVLEYLMQKQSIEYDKMNLELPRINSSTQLDLADIKYAIEELKVDQSIRLA 73
Query: 67 RLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILY 103
R++ Q ++ K + FNALIRP TT FWII++
Sbjct: 74 RIKAQKVKNG--SGVKWIDGFNALIRPLTTFFWIIIF 108
>gi|315121790|ref|YP_004062279.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495192|gb|ADR51791.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 121
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 61/101 (60%), Gaps = 13/101 (12%)
Query: 1 MISFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK- 55
M SFL + R ++F+PS+F + + EY+M+++SIE+D+ +LE+A+I +TQ+DL
Sbjct: 2 MESFLASGLFRLALRFIPSVFEKIADGVLEYLMQKQSIEYDKTKLELARINGSTQLDLAD 61
Query: 56 ------ALESETPVRLARLQNQANEDQFERESKAMIFFNAL 90
L+ + +RLAR++ Q + + K + F++L
Sbjct: 62 IKYAIEELKVDQSIRLARIKAQ--KVKSGSGVKWIDGFDSL 100
>gi|315122634|ref|YP_004063123.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496036|gb|ADR52635.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 228
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
Query: 24 LEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK-------ALESETPVRLARLQNQANEDQ 76
+ E++M+++ IE+D+ +LE +IQSTTQ+DL L+ + P+RLAR++ Q + +
Sbjct: 131 ISEHLMQKRFIEYDKTKLEQTRIQSTTQLDLADIKLGIEELKVDQPIRLARIKAQ--KVK 188
Query: 77 FERESKAMIFFNALIRPFTTLF 98
K + FN+LIRP TT F
Sbjct: 189 SSSGVKWIDGFNSLIRPLTTFF 210
>gi|315122322|ref|YP_004062811.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495724|gb|ADR52323.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 52 VDLKALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILY 103
+ ++ L+ + P+RLAR++ Q + + K + FNALIRP TT FWII++
Sbjct: 1 MGIEELKVDQPIRLARIKAQ----KVKSGVKWIDGFNALIRPLTTFFWIIVF 48
>gi|315122323|ref|YP_004062812.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495725|gb|ADR52324.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 40
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 111 VEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
++ G + PL++L+PF QDIIACILGFW TD IVQ+++G
Sbjct: 1 MKGGIFDRSPLSILSPFEQDIIACILGFWCTDKIVQKKRG 40
>gi|315122321|ref|YP_004062810.1| hypothetical protein CKC_02865 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495723|gb|ADR52322.1| hypothetical protein CKC_02865 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 45
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 5 LTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTT 50
+ G + ++F PS+F+ + EY+M+++SIE+D+++ E +IQS T
Sbjct: 1 MQGGLFS-ALRFFPSVFDGVLEYLMQKQSIEYDKMKPEQTRIQSAT 45
>gi|17547913|ref|NP_521315.1| hypothetical protein RSc3194 [Ralstonia solanacearum GMI1000]
gi|17430219|emb|CAD16982.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 160
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 26 EYIMKEKSIEHDRLR--LEIAKIQSTTQV--DLKALESETPVRLARLQNQANEDQFERES 81
E M++K++E ++LR +A+I ++ + A+E+ L++ +
Sbjct: 33 ELAMQDKALEFEKLRGAQRMAEIGASADAAWNTGAIEA--------LRDSITAQGEKTGV 84
Query: 82 KAMIFFNALIRPFTTLFWIILY---PLLIWWGVEKGYLTKDPLTLLAPFT---QDIIACI 135
+ + +RP T ++++Y L + G + + P LLA ++ Q ++A I
Sbjct: 85 RWADALSTTVRPVVTYLFVLMYTGVKLSTFGGSAQAGVGFGP-ALLAAWSEADQALLAGI 143
Query: 136 LGFWFTDTIVQRRKG 150
L FWF + +RR G
Sbjct: 144 LNFWFISRVWERRGG 158
>gi|20091901|ref|NP_617976.1| flagellar assembly protein J [Methanosarcina acetivorans C2A]
gi|19917097|gb|AAM06456.1| flagella accessory protein J [Methanosarcina acetivorans C2A]
Length = 520
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 26 EYIMKE-KSIEHDRLRLEIAKIQSTTQVDLKALESETPVRLARLQNQANEDQFERESKAM 84
+YI ++ K + + + +A I S+ + + L+ E +R + + E E K
Sbjct: 97 QYISQKLKDVYLSKFLVRMANILSSGEQEKNFLKQEKIIR-EEIYSNEYERSVESLKKWT 155
Query: 85 IFFNALIRPFTTLFWIILYPLLIW 108
+NAL+ T + IIL ++I+
Sbjct: 156 DGYNALMVSVTLVVTIILVSVMIY 179
>gi|331650027|ref|ZP_08351100.1| terminase small subunit (Gp1) [Escherichia coli M605]
gi|331040972|gb|EGI13129.1| terminase small subunit (Gp1) [Escherichia coli M605]
Length = 182
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 23 LLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE-TPVRLARLQNQANEDQFERES 81
++E Y +EK IE+++LR E+A +++ T+ DL+ + RL + Q A E + R+S
Sbjct: 46 VIEWYAQREKDIENEKLRKEVADLRAATESDLQPGTIDYERYRLTKAQADAQELKNARDS 105
Query: 82 KAMI 85
+I
Sbjct: 106 ALVI 109
>gi|315122366|ref|YP_004062855.1| hypothetical protein CKC_03090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495768|gb|ADR52367.1| hypothetical protein CKC_03090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 52
Score = 34.2 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 106 LIWWGVEKGYLTKDPLTLLA----PFTQDIIACILGFWFTDTIVQRR 148
IW G+E + + L + QDII+ +LGFWF+D +V++
Sbjct: 5 FIWQGIESELFDQKTIATLLVTILEYGQDIISSVLGFWFSDGVVKKE 51
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.321 0.145 0.435
Lambda K H
0.267 0.0433 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,539,350,552
Number of Sequences: 14124377
Number of extensions: 61451732
Number of successful extensions: 237210
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 237143
Number of HSP's gapped (non-prelim): 54
length of query: 151
length of database: 4,842,793,630
effective HSP length: 114
effective length of query: 37
effective length of database: 3,232,614,652
effective search space: 119606742124
effective search space used: 119606742124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.3 bits)
S2: 76 (33.8 bits)