HHsearch alignment for GI: 254780989 and conserved domain: PRK13834

>PRK13834 putative autoinducer synthesis protein; Provisional.
Probab=95.72  E-value=0.14  Score=29.74  Aligned_cols=128  Identities=9%  Similarity=0.016  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEE-CCEEEEEEEEEEEEE-----------------
Q ss_conf             89999999997278766675615202541200025766548999989-878647999999886-----------------
Q gi|254780989|r   24 QVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRD-GDRIVGAIRATPIQI-----------------   85 (185)
Q Consensus        24 ~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~-d~~iVG~i~~~~~~~-----------------   85 (185)
T Consensus        18 l~~m~rlR~~vF~drLgW~v~~~~----g~E~D~fD~~~~~Yll~~~~~g~v~G~~RLlpTt~p~ML~~~Fp~ll~~~~~   93 (207)
T PRK13834         18 LHQMHRLRARVFGGRLGWDVEIID----GCESDQFDDLKPTYILAISDSGRVAGCARLLPALGPTMLADVFPQLLPDGRL   93 (207)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCC----CCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCC
T ss_conf             999999999997660586876899----9883268999986999990898489899633789976334705776389999


Q ss_pred             -CCCCEEEEEEEEECHHHH---CCC----HHHHHHHHHHHHHHHCCCCEEEEECCHH---HHHHCCCEEHHHCCCCCCCC
Q ss_conf             -067848998677525461---599----8999999999999988997999950832---54313858705278267798
Q gi|254780989|r   86 -GKYKGFLRGPLGVLSEYR---KRG----IGSRLAYMSFMAIKNSGAEFVLIDAKHD---WHKHLGFKKPHQHQIRYAHG  154 (185)
Q Consensus        86 -~~~~~~~l~~laV~P~~q---g~G----iG~~Li~~~l~~a~~~G~~~v~l~~~~~---~Y~r~GF~~~~~~~i~~~~~  154 (185)
T Consensus        94 p~~~~i~E~SRF~Vd~~~~~~~~~~~~~~~t~~L~~a~ve~a~~~Gi~~ivtV~~~~~eRiL~R~G~~~~r-LG~p~~ig  172 (207)
T PRK13834         94 NAHPAMIESSRFCVDTTLAEGRGGGSLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILARAGWPMQR-LGEPKAIG  172 (207)
T ss_pred             CCCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCEEE-CCCCEEEC
T ss_conf             99999899783489776665556887277899999999999998799889999438999999985995596-76887778


Q ss_pred             CC
Q ss_conf             88
Q gi|254780989|r  155 GG  156 (185)
Q Consensus       155 ~~  156 (185)
T Consensus       173 ~~  174 (207)
T PRK13834        173 NT  174 (207)
T ss_pred             CE
T ss_conf             87