HHsearch alignment for GI: 254780989 and conserved domain: TIGR03245
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=97.70 E-value=0.0003 Score=45.90 Aligned_cols=126 Identities=11% Similarity=0.134 Sum_probs=74.5
Q ss_pred EECCCCHHHHHHHHHHHHHHCC--CCCCCCCCCEEHHHHHCHHC---CCC--CCCEEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf 7513797578999999999727--87666756152025412000---257--66548999989--8786479999998--
Q gi|254780989|r 15 TFANEQRVDQVAVDEVMVKAFL--STQEITDDVLHKYVRNNVEE---PLS--FVRLMSFVCRD--GDRIVGAIRATPI-- 83 (185)
Q Consensus 15 ~IR~a~~~D~~aI~~L~~~aF~--~~~~~~~~~~~~~~~~~~~~---~~~--~~~~l~~Vae~--d~~iVG~i~~~~~-- 83 (185)
T Consensus 1 vvRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~~~~~~~~e~YlFVLEd~~tg~vvG~s~I~a~vG 80 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAG 80 (336)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEC
T ss_conf 94447411199999999973999655999999999999999998635567888740899998568891899874786104
Q ss_pred --------EE----------------------CCC-CEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCC---CCEEEE
Q ss_conf --------86----------------------067-84899867752546159989999999999999889---979999
Q gi|254780989|r 84 --------QI----------------------GKY-KGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSG---AEFVLI 129 (185)
Q Consensus 84 --------~~----------------------~~~-~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G---~~~v~l 129 (185)
T Consensus 81 ~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~l~~d~tG~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~~rF~~~viA 160 (336)
T TIGR03245 81 YGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIV 160 (336)
T ss_pred CCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHEE
T ss_conf 89872899926467525035974230059986168887057999978787478605689999999998717661203103
Q ss_pred E--------CCHHHHHHCC
Q ss_conf 5--------0832543138
Q gi|254780989|r 130 D--------AKHDWHKHLG 140 (185)
Q Consensus 130 ~--------~~~~~Y~r~G 140 (185)
T Consensus 161 EmRG~~d~~G~SPFW~~lg 179 (336)
T TIGR03245 161 EIQGVQDDNGDSPFWDAIG 179 (336)
T ss_pred HHCCCCCCCCCCCCHHHHH
T ss_conf 0058548999983078763