HHsearch results for GI: 254780989 and protein with PDBid: 1mk4_A

>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=99.75  E-value=1.2e-17  Score=125.29  Aligned_cols=144  Identities=17%  Similarity=0.181  Sum_probs=106.2

Q ss_pred             CEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEECCCCEEE
Q ss_conf             20751379757899999999972787666756152025412000257665489999898786479999998860678489
Q gi|254780989|r   13 GLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQIGKYKGFL   92 (185)
Q Consensus        13 ~l~IR~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~~~~~~~~   92 (185)
                      +|.||+++++|.++|.+|..+.|+....  .....+...+.       ....+||+++++++||++..... .......+
T Consensus         1 hm~IR~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~v~~~~~~ivG~~~~~~~-~~~~~~~~   70 (157)
T 1mk4_A            1 HMDIRTITSSDYEMVTSVLNEWWGGRQL--KEKLPRLFFEH-------FQDTSFITSEHNSMTGFLIGFQS-QSDPETAY   70 (157)
T ss_dssp             CCEEEECCGGGHHHHHHHTTTSSTTCCC--SCCCCTHHHHH-------CGGGCEEEESSSSEEEEEEEEEC-SSSTTEEE
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHH-------CCCEEEEEEECCEEEEEEEEEEC-CCCCCEEE
T ss_conf             9799969989999999999987268885--25669999862-------78709999999999999999965-78898799


Q ss_pred             EEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHH------HHHHCCCEEHHHCCC------CCC-CCCCCHH
Q ss_conf             986775254615998999999999999988997999950832------543138587052782------677-9888823
Q gi|254780989|r   93 RGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKHD------WHKHLGFKKPHQHQI------RYA-HGGGAAT  159 (185)
Q Consensus        93 l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~~------~Y~r~GF~~~~~~~i------~~~-~~~~~~~  159 (185)
                      +..++|+|+|||+|+|++|++++++.++++|+..+.+.+.++      ||+|+||+.......      ..- .+...+.
T Consensus        71 ~~~i~V~~~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~~y~g~~~~~  150 (157)
T 1mk4_A           71 IHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDR  150 (157)
T ss_dssp             EEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCB
T ss_pred             EEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCEE
T ss_conf             99999988996998999999999999998799899999928989999999988999940481127933672679999658


Q ss_pred             HEEEEEC
Q ss_conf             2265440
Q gi|254780989|r  160 DWLVHIF  166 (185)
Q Consensus       160 ~~~~~~l  166 (185)
                      .+++|-|
T Consensus       151 ~~~~k~l  157 (157)
T 1mk4_A          151 VLFVKNI  157 (157)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEC
T ss_conf             9999989