HHsearch results for GI: 254780989 and protein with PDBid: 1mk4_A
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=99.75 E-value=1.2e-17 Score=125.29 Aligned_cols=144 Identities=17% Similarity=0.181 Sum_probs=106.2
Q ss_pred CEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEECCCCEEE
Q ss_conf 20751379757899999999972787666756152025412000257665489999898786479999998860678489
Q gi|254780989|r 13 GLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQIGKYKGFL 92 (185)
Q Consensus 13 ~l~IR~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~~~~~~~~ 92 (185)
+|.||+++++|.++|.+|..+.|+.... .....+...+. ....+||+++++++||++..... .......+
T Consensus 1 hm~IR~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~v~~~~~~ivG~~~~~~~-~~~~~~~~ 70 (157)
T 1mk4_A 1 HMDIRTITSSDYEMVTSVLNEWWGGRQL--KEKLPRLFFEH-------FQDTSFITSEHNSMTGFLIGFQS-QSDPETAY 70 (157)
T ss_dssp CCEEEECCGGGHHHHHHHTTTSSTTCCC--SCCCCTHHHHH-------CGGGCEEEESSSSEEEEEEEEEC-SSSTTEEE
T ss_pred CEEEEECCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHH-------CCCEEEEEEECCEEEEEEEEEEC-CCCCCEEE
T ss_conf 9799969989999999999987268885--25669999862-------78709999999999999999965-78898799
Q ss_pred EEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHH------HHHHCCCEEHHHCCC------CCC-CCCCCHH
Q ss_conf 986775254615998999999999999988997999950832------543138587052782------677-9888823
Q gi|254780989|r 93 RGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKHD------WHKHLGFKKPHQHQI------RYA-HGGGAAT 159 (185)
Q Consensus 93 l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~~------~Y~r~GF~~~~~~~i------~~~-~~~~~~~ 159 (185)
+..++|+|+|||+|+|++|++++++.++++|+..+.+.+.++ ||+|+||+....... ..- .+...+.
T Consensus 71 ~~~i~V~~~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~~y~g~~~~~ 150 (157)
T 1mk4_A 71 IHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDR 150 (157)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCB
T ss_pred EEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCEE
T ss_conf 99999988996998999999999999998799899999928989999999988999940481127933672679999658
Q ss_pred HEEEEEC
Q ss_conf 2265440
Q gi|254780989|r 160 DWLVHIF 166 (185)
Q Consensus 160 ~~~~~~l 166 (185)
.+++|-|
T Consensus 151 ~~~~k~l 157 (157)
T 1mk4_A 151 VLFVKNI 157 (157)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
T ss_conf 9999989