HHsearch results for GI: 254780989 and protein with PDBid: 1ro5_A

>1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signaling protein; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3
Probab=98.71  E-value=6e-07  Score=60.82  Aligned_cols=125  Identities=5%  Similarity=-0.071  Sum_probs=90.2

Q ss_pred             EECC-CCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEE--------
Q ss_conf             7513-7975789999999997278766675615202541200025766548999989878647999999886--------
Q gi|254780989|r   15 TFAN-EQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQI--------   85 (185)
Q Consensus        15 ~IR~-a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~--------   85 (185)
                      ..|. ..+++...+.+|-.++|-............    ...+..+......+++..+|++||++.+.+.+-        
T Consensus         9 ~~~~~~~~~~~~~~~rlR~~VFv~e~gw~~~~~~~----~E~D~~D~~~~~~lv~~~~g~vvg~~Rl~~~~~~~~l~~~f   84 (201)
T 1ro5_A            9 GRREEFDKKLLGEMHKLRAQVFKERKGWDVSVIDE----MEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTF   84 (201)
T ss_dssp             EEGGGSCHHHHHHHHHHHHHHHTTCSSSCCCEETT----EECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTC
T ss_pred             ECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH----HCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHH
T ss_conf             01430999999999999999987752898899721----11035787785799971698168998632689886420322


Q ss_pred             ----------CCCCEEEEEEEEECHHHHCCC----HHHHHHHHHHHHHHHCCCCEEEEECCHH---HHHHCCCEE
Q ss_conf             ----------067848998677525461599----8999999999999988997999950832---543138587
Q gi|254780989|r   86 ----------GKYKGFLRGPLGVLSEYRKRG----IGSRLAYMSFMAIKNSGAEFVLIDAKHD---WHKHLGFKK  143 (185)
Q Consensus        86 ----------~~~~~~~l~~laV~P~~qg~G----iG~~Li~~~l~~a~~~G~~~v~l~~~~~---~Y~r~GF~~  143 (185)
                                .+...+.++.++|+|++++++    ++..|+..+.+.+.+.|.+.++...++.   +|.|+||..
T Consensus        85 ~~~~~~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~~~~~~~~r~~~r~G~~~  159 (201)
T 1ro5_A           85 PELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDV  159 (201)
T ss_dssp             GGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEE
T ss_pred             HHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCE
T ss_conf             354268765788866999989984321456553189999999999999988998999994589999999869975