HHsearch results for GI: 254780989 and protein with PDBid: 1vkc_A
>1vkc_A Putative acetyl transferase; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=99.55 E-value=3.8e-14 Score=104.17 Aligned_cols=133 Identities=17% Similarity=0.110 Sum_probs=87.0
Q ss_pred CEEECCCCHH-HHHHHHHHHHHHCCCCCC--CCCCCEEHHHHHCHHCCCCCCCEEEEEEEE-CCEEEEEEEEEEEEE--C
Q ss_conf 2075137975-789999999997278766--675615202541200025766548999989-878647999999886--0
Q gi|254780989|r 13 GLTFANEQRV-DQVAVDEVMVKAFLSTQE--ITDDVLHKYVRNNVEEPLSFVRLMSFVCRD-GDRIVGAIRATPIQI--G 86 (185)
Q Consensus 13 ~l~IR~a~~~-D~~aI~~L~~~aF~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~-d~~iVG~i~~~~~~~--~ 86 (185)
|=.+|..... +.+.|.++.......... ...+...+..+..+.+.........||+++ ++++||++.+.+... .
T Consensus 8 ~~ef~i~d~ed~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~ 87 (158)
T 1vkc_A 8 GSEYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVD 87 (158)
T ss_dssp --CEEEEECGGGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTT
T ss_pred CCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEEECCCCC
T ss_conf 44769975298899999999999999984888815689999999999984999479999973997999999997047778
Q ss_pred CCCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCH-----HHHHHCCCEEHH
Q ss_conf 67848998677525461599899999999999998899799995083-----254313858705
Q gi|254780989|r 87 KYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKH-----DWHKHLGFKKPH 145 (185)
Q Consensus 87 ~~~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~-----~~Y~r~GF~~~~ 145 (185)
.....+|..|+|+|+|||+|+|++||+.++++++++|+..+.|.+.. .||+|+||++.+
T Consensus 88 ~~~~~~i~~l~V~p~~RgkGiG~~Ll~~~~~~a~~~G~~~i~L~v~~~N~A~~~Y~k~GF~~~~ 151 (158)
T 1vkc_A 88 YVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARA 151 (158)
T ss_dssp CSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCC
T ss_pred CCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEEE
T ss_conf 8658999999998889199969999999999999869988999988997899999988998998