HHsearch results for GI: 254780989 and protein with PDBid: 1yle_A
>1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, PSI, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8
Probab=98.23 E-value=2.1e-05 Score=51.54 Aligned_cols=127 Identities=12% Similarity=0.117 Sum_probs=80.5
Q ss_pred EEECCCCHHHHHHHHHHHHHHCC--CCCCCCCCCEEHHHHHCHH---CCC--CCCCEEEEEEEE--CCEEEEEEEEEE--
Q ss_conf 07513797578999999999727--8766675615202541200---025--766548999989--878647999999--
Q gi|254780989|r 14 LTFANEQRVDQVAVDEVMVKAFL--STQEITDDVLHKYVRNNVE---EPL--SFVRLMSFVCRD--GDRIVGAIRATP-- 82 (185)
Q Consensus 14 l~IR~a~~~D~~aI~~L~~~aF~--~~~~~~~~~~~~~~~~~~~---~~~--~~~~~l~~Vae~--d~~iVG~i~~~~-- 82 (185)
|.||+++++|.+++.+|..++-. ++-+...+.+...++.... ... .....+.||.|+ .|+|||......
T Consensus 4 lviRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 83 (342)
T 1yle_A 4 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 83 (342)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEE
T ss_conf 99964743109999999997499864599999999999999999861557888875389999977899299987689602
Q ss_pred ----------E-E------------------E-CCC-CEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCC---CCEEE
Q ss_conf ----------8-8------------------6-067-84899867752546159989999999999999889---97999
Q gi|254780989|r 83 ----------I-Q------------------I-GKY-KGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSG---AEFVL 128 (185)
Q Consensus 83 ----------~-~------------------~-~~~-~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G---~~~v~ 128 (185)
. + . ... ....|+.|.++|+||+.|.|+.|-+.-+--+.+.- .+.|+
T Consensus 84 G~~~Pfy~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~erF~~~vi 163 (342)
T 1yle_A 84 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVV 163 (342)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEE
T ss_pred CCCCCCEEEEECCCEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 38989889995863122656787301026998747758701689997888747864107999999999866765140201
Q ss_pred EE--------CCHHHHHHCC
Q ss_conf 95--------0832543138
Q gi|254780989|r 129 ID--------AKHDWHKHLG 140 (185)
Q Consensus 129 l~--------~~~~~Y~r~G 140 (185)
.+ |...||..+|
T Consensus 164 AEmRG~~D~~G~SPFW~~lg 183 (342)
T 1yle_A 164 VEIVGYSDEQGESPFWNAVG 183 (342)
T ss_dssp EECCBCCCTTCCCHHHHHTG
T ss_pred EECCCCCCCCCCCCCHHHHH
T ss_conf 50048558999983077763