HHsearch results for GI: 254780989 and protein with PDBid: 3ddd_A
>3ddd_A Putative acetyltransferase; NP_142035.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: COA; 2.25A {Pyrococcus horikoshii}
Probab=99.83 E-value=7.4e-20 Score=138.61 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=98.3
Q ss_pred CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEECC
Q ss_conf 21000207513797578999999999727876667561520254120002576654899998987864799999988606
Q gi|254780989|r 8 NIELEGLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQIGK 87 (185)
Q Consensus 8 ~~~~~~l~IR~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~~~ 87 (185)
|+-+++|+||.++++|.++|.+|..++|+..... +......+..+. ..+..+|||+.||++||++.+.+ .
T Consensus 14 ~~~~q~m~IR~at~~D~~~l~~l~~~~~~~~~~~--d~~~~~~e~~l~----~~~~~~~va~~~g~~vG~~~~~~----~ 83 (288)
T 3ddd_A 14 NLYFQGMIIRYATPDDIEDMVSIFIDAYNFPGPR--ESVKSSFEISLE----VQPDGCLLAFLKDEPVGMGCIFF----Y 83 (288)
T ss_dssp SCCSTTCEEEECCGGGHHHHHHHHHHHHTCCSCH--HHHHHHHHHHHH----HCTTCEEEEEETTEEEEEEEEEE----C
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHH----CCCCEEEEEEECCEEEEEEEEEE----C
T ss_conf 2466751999899999999999999970489966--889999999973----69986999999999999999997----2
Q ss_pred CCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCH---HHHHHCCCEEHHH
Q ss_conf 7848998677525461599899999999999998899799995083---2543138587052
Q gi|254780989|r 88 YKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKH---DWHKHLGFKKPHQ 146 (185)
Q Consensus 88 ~~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~---~~Y~r~GF~~~~~ 146 (185)
.+..+|+.++|+|+|||||+|++|++++++.++..+ ..+.|.+++ .||+|+||+....
T Consensus 84 ~~~~~i~~~~V~p~~rgkGiG~~Ll~~~l~~a~~~~-~~i~L~~~~~~~~lY~k~GF~~~~~ 144 (288)
T 3ddd_A 84 NKQAWIGLMGVKKAYQRRGIGTEVFRRLLEIGRRKV-DTIRLDASSQGYGLYKKFKFVDEYR 144 (288)
T ss_dssp SSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC-SEEEEEECTTTHHHHHHTTCEEEEE
T ss_pred CCEEEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHC-CEEEEECCHHHHHHHHHCCCEEECE
T ss_conf 998999999996232189899999999999988539-8899815887888998589989052