HHsearch results for GI: 254780989 and protein with PDBid: 3i9s_A
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=99.76 E-value=6.6e-18 Score=126.85 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=95.7
Q ss_pred CCCCEEECCCCHHHHHHHHHHHHHH----CCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf 0002075137975789999999997----278766675615202541200025766548999989878647999999886
Q gi|254780989|r 10 ELEGLTFANEQRVDQVAVDEVMVKA----FLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQI 85 (185)
Q Consensus 10 ~~~~l~IR~a~~~D~~aI~~L~~~a----F~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~ 85 (185)
+...++||+++++|.++|..|..+. +.... .........+..... ........+||+.++++||++.+.+..-
T Consensus 20 ~~~~i~IR~a~~~D~~~i~~l~~el~~~~~~~~~-~~~~~~~~~l~~~~~--~~~~~~~~~va~~~~~iVG~~~~~~~~~ 96 (183)
T 3i9s_A 20 QGMSVEIKRVDKHHCLDLVGIFIELERYYFGDKA-ASEQDLANYLSHQVF--SEHSGVKVIAAVEHDKVLGFATYTIMFP 96 (183)
T ss_dssp ---CCEEEECCGGGGGGGHHHHHHHHHHHHGGGC-CCHHHHHHHHHHTTT--STTCCCEEEEEEETTEEEEEEEEEEESC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHC--CCCCCEEEEEEEECCEEEEEEEEEEECC
T ss_conf 4875899999999999999999999998656532-388999999999743--7798609999998999999999997158
Q ss_pred --CCCCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCH------HHHHHCCCEEHHH
Q ss_conf --067848998677525461599899999999999998899799995083------2543138587052
Q gi|254780989|r 86 --GKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKH------DWHKHLGFKKPHQ 146 (185)
Q Consensus 86 --~~~~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~------~~Y~r~GF~~~~~ 146 (185)
......+|..|+|+|+|||+|||++|++++++.++++|+..+.+.+.+ .||+|+||++..+
T Consensus 97 ~~~~~~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fYek~Gf~~~~~ 165 (183)
T 3i9s_A 97 APKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIRE 165 (183)
T ss_dssp CGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTT
T ss_pred CCCCCCEEEEEEEEECHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEECC
T ss_conf 656798799980197300379879999999999999986999999999288999999999879989120