HHsearch results for GI: 254780989 and protein with PDBid: 3i9s_A

>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=99.76  E-value=6.6e-18  Score=126.85  Aligned_cols=134  Identities=13%  Similarity=0.111  Sum_probs=95.7

Q ss_pred             CCCCEEECCCCHHHHHHHHHHHHHH----CCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             0002075137975789999999997----278766675615202541200025766548999989878647999999886
Q gi|254780989|r   10 ELEGLTFANEQRVDQVAVDEVMVKA----FLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQI   85 (185)
Q Consensus        10 ~~~~l~IR~a~~~D~~aI~~L~~~a----F~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~   85 (185)
                      +...++||+++++|.++|..|..+.    +.... .........+.....  ........+||+.++++||++.+.+..-
T Consensus        20 ~~~~i~IR~a~~~D~~~i~~l~~el~~~~~~~~~-~~~~~~~~~l~~~~~--~~~~~~~~~va~~~~~iVG~~~~~~~~~   96 (183)
T 3i9s_A           20 QGMSVEIKRVDKHHCLDLVGIFIELERYYFGDKA-ASEQDLANYLSHQVF--SEHSGVKVIAAVEHDKVLGFATYTIMFP   96 (183)
T ss_dssp             ---CCEEEECCGGGGGGGHHHHHHHHHHHHGGGC-CCHHHHHHHHHHTTT--STTCCCEEEEEEETTEEEEEEEEEEESC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHC--CCCCCEEEEEEEECCEEEEEEEEEEECC
T ss_conf             4875899999999999999999999998656532-388999999999743--7798609999998999999999997158


Q ss_pred             --CCCCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCH------HHHHHCCCEEHHH
Q ss_conf             --067848998677525461599899999999999998899799995083------2543138587052
Q gi|254780989|r   86 --GKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKH------DWHKHLGFKKPHQ  146 (185)
Q Consensus        86 --~~~~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~------~~Y~r~GF~~~~~  146 (185)
                        ......+|..|+|+|+|||+|||++|++++++.++++|+..+.+.+.+      .||+|+||++..+
T Consensus        97 ~~~~~~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fYek~Gf~~~~~  165 (183)
T 3i9s_A           97 APKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIRE  165 (183)
T ss_dssp             CGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTT
T ss_pred             CCCCCCEEEEEEEEECHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEECC
T ss_conf             656798799980197300379879999999999999986999999999288999999999879989120