BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780989|ref|YP_003065402.1| GCN5-related N-acetyltransferase [Candidatus Liberibacter asiaticus str. psy62] (185 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780989|ref|YP_003065402.1| GCN5-related N-acetyltransferase [Candidatus Liberibacter asiaticus str. psy62] Length = 185 Score = 387 bits (993), Expect = e-110, Method: Compositional matrix adjust. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MPKQPNVNIELEGLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSF 60 MPKQPNVNIELEGLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSF Sbjct: 1 MPKQPNVNIELEGLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSF 60 Query: 61 VRLMSFVCRDGDRIVGAIRATPIQIGKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIK 120 VRLMSFVCRDGDRIVGAIRATPIQIGKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIK Sbjct: 61 VRLMSFVCRDGDRIVGAIRATPIQIGKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIK 120 Query: 121 NSGAEFVLIDAKHDWHKHLGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIMENMIGKMSL 180 NSGAEFVLIDAKHDWHKHLGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIMENMIGKMSL Sbjct: 121 NSGAEFVLIDAKHDWHKHLGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIMENMIGKMSL 180 Query: 181 RREYD 185 RREYD Sbjct: 181 RREYD 185 >gi|254780962|ref|YP_003065375.1| hypothetical protein CLIBASIA_04315 [Candidatus Liberibacter asiaticus str. psy62] Length = 49 Score = 80.9 bits (198), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/68 (64%), Positives = 46/68 (67%), Gaps = 20/68 (29%) Query: 117 MAIKNSGAEFVLIDAKHDWHKHLGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIMENMIG 176 MAIKNSGAEFVLIDAK D +KHLGFKKP IFKNNIMENMIG Sbjct: 1 MAIKNSGAEFVLIDAKSDGYKHLGFKKP--------------------IFKNNIMENMIG 40 Query: 177 KMSLRREY 184 +MSLRREY Sbjct: 41 RMSLRREY 48 >gi|254781162|ref|YP_003065575.1| GCN5-related N-acetyltransferase [Candidatus Liberibacter asiaticus str. psy62] Length = 192 Score = 64.7 bits (156), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 49/79 (62%) Query: 64 MSFVCRDGDRIVGAIRATPIQIGKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSG 123 +SF+C +G RIVG++R TPI I K G L GP+ V Y+ +GIG +L MS A + G Sbjct: 74 LSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKG 133 Query: 124 AEFVLIDAKHDWHKHLGFK 142 ++ +++ ++ LGF+ Sbjct: 134 SQVIVLVGDIAYYSKLGFQ 152 >gi|254781155|ref|YP_003065568.1| hypothetical protein CLIBASIA_05310 [Candidatus Liberibacter asiaticus str. psy62] Length = 35 Score = 52.4 bits (124), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 22/34 (64%), Positives = 27/34 (79%) Query: 139 LGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIME 172 +GFKKP+Q+QI +A GG T WLVHIFK N+ME Sbjct: 1 MGFKKPYQNQIEHAQGGRKTTAWLVHIFKKNLME 34 >gi|254780549|ref|YP_003064962.1| signal peptide protein [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 22.7 bits (47), Expect = 4.2, Method: Compositional matrix adjust. Identities = 9/27 (33%), Positives = 17/27 (62%) Query: 1 MPKQPNVNIELEGLTFANEQRVDQVAV 27 + K N +L+G++FA ++ +D V V Sbjct: 128 ISKATNKEQDLQGISFAEKKSIDTVVV 154 >gi|254780879|ref|YP_003065292.1| hypothetical protein CLIBASIA_03880 [Candidatus Liberibacter asiaticus str. psy62] Length = 652 Score = 21.9 bits (45), Expect = 6.7, Method: Compositional matrix adjust. Identities = 8/14 (57%), Positives = 11/14 (78%) Query: 18 NEQRVDQVAVDEVM 31 NE RVDQ+ DE++ Sbjct: 310 NEVRVDQLTKDEIL 323 >gi|254780264|ref|YP_003064677.1| elongation factor G [Candidatus Liberibacter asiaticus str. psy62] Length = 701 Score = 21.9 bits (45), Expect = 7.3, Method: Compositional matrix adjust. Identities = 7/17 (41%), Positives = 9/17 (52%) Query: 146 QHQIRYAHGGGAATDWL 162 H+I H G A DW+ Sbjct: 37 SHKIGEVHDGSATMDWM 53 >gi|254780142|ref|YP_003064555.1| DNA-directed RNA polymerase subunit beta' [Candidatus Liberibacter asiaticus str. psy62] Length = 1398 Score = 21.9 bits (45), Expect = 7.4, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 7/77 (9%) Query: 21 RVDQVAVD----EVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVG 76 R++ VA++ EV+V+ L EITD +Y+ + + + L + + G ++V Sbjct: 1237 RLEGVAINHKHIEVVVRHMLQKVEITDPADTEYILGDNVDRIEVEELNRSLAQQGKKLVS 1296 Query: 77 AIRATPIQIGKYKGFLR 93 +PI G K L+ Sbjct: 1297 ---FSPILQGITKASLQ 1310 >gi|254780594|ref|YP_003065007.1| Glutathione S-transferase domain protein [Candidatus Liberibacter asiaticus str. psy62] Length = 230 Score = 21.6 bits (44), Expect = 9.8, Method: Compositional matrix adjust. Identities = 10/50 (20%), Positives = 26/50 (52%) Query: 125 EFVLIDAKHDWHKHLGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIMENM 174 E+ + + D + L ++ ++ + GGG+ ++ I +NN+ E++ Sbjct: 100 EWFMYQMEQDVTRPLAHERVYKLHMTTEQGGGSPDSKVLRIARNNMREHI 149 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.323 0.139 0.416 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 117,687 Number of Sequences: 1233 Number of extensions: 4734 Number of successful extensions: 16 Number of sequences better than 100.0: 10 Number of HSP's better than 100.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 5 Number of HSP's gapped (non-prelim): 10 length of query: 185 length of database: 328,796 effective HSP length: 69 effective length of query: 116 effective length of database: 243,719 effective search space: 28271404 effective search space used: 28271404 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 36 (18.5 bits)