RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780990|ref|YP_003065403.1| hypothetical protein
CLIBASIA_04455 [Candidatus Liberibacter asiaticus str. psy62]
         (66 letters)



>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
          C-terminal domain {Escherichia coli [TaxId: 562]}
          Length = 156

 Score = 24.0 bits (51), Expect = 3.7
 Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 6/55 (10%)

Query: 11 DLFEEDLFQYDANKSELVLISSLWSIDFFEINCALLRRRHPINKYEKTDNFFALY 65
          +  E+++  Y A + + V+        F +I C    + H              Y
Sbjct: 12 NALEKEMIVYKAPQEKHVIT------VFTDITCGYCHKLHEQMADYNALGITVRY 60


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.144    0.442 

Gapped
Lambda     K      H
   0.267   0.0493    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 266,543
Number of extensions: 9506
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 2
Length of query: 66
Length of database: 2,407,596
Length adjustment: 35
Effective length of query: 31
Effective length of database: 1,927,046
Effective search space: 59738426
Effective search space used: 59738426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.4 bits)