HHsearch alignment for GI: 254780991 and conserved domain: COG0322

>COG0322 UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair].

Probab=97.17  E-value=0.0015  Score=45.14  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=15.9

Q ss_pred             EEEECCCCCCHHHHH-HHHHHHHCCCCCEEEEHHHHHCCCC
Q ss_conf             687325764578999-9999973189869998458753578
Q gi|254780991|r  608 RVRYMHSEVKTLERI-EIIRDLRLGKFDVLVGINLLREGLD  647 (805)
Q Consensus       608 ~~~~~h~~~~~~~r~-~il~~~~~g~~diLvgt~~~akGlD  647 (805)
T Consensus       446 dli~iDGGkgQl~~a~~vl~~l~~~~--~vig---laK~~~  481 (581)
T COG0322         446 DLILIDGGKGQLNAAKEVLKELGLDI--PVIG---LAKGEE  481 (581)
T ss_pred             CEEEEECCHHHHHHHHHHHHHCCCCC--CEEE---EEECCC
T ss_conf             77999697889999999999759986--1799---971686