HHsearch alignment for GI: 254780991 and conserved domain: COG0468

Probab=92.86  E-value=0.74  Score=24.95  Aligned_cols=107  Identities=19%  Similarity=0.224  Sum_probs=67.5

Q ss_pred             HHHHHHH-HHHHCCCCEEEEEEECCCCHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCC
Q ss_conf             9999999-9887397337998633764699999999971---99789993163468999999998678983899862134
Q gi|254780991|r  155 AAIAQLL-KGIHSREKVQLLLGVTGSGKTFTMAKVIEAM---QRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYD  230 (805)
Q Consensus       155 ~Ai~~L~-~~l~~g~~~qlL~GVTGSGKTevya~lI~~~---gr~aLvLvPei~La~QL~~rfk~~Fp~n~V~~f~S~~~  230 (805)
T Consensus        47 ~~LD~~LGGGl~~g-~ItEiyG~~gsGKT~lal~~~~~aq~~g~~a~fIDtE~~l~p~r~~~l~~~~~d~l~---v----  118 (279)
T COG0468          47 LALDEALGGGLPRG-RITEIYGPESSGKTTLALQLVANAQKPGGKAAFIDTEHALDPERAKQLGVDLLDNLL---V----  118 (279)
T ss_pred             HHHHHHHCCCCCCC-EEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEE---E----
T ss_conf             55787746886553-589984688765466899998886537980899958999899999998875421536---8----


Q ss_pred             CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC---CCCEEEECCHHHHCCCCCHHHHHC
Q ss_conf             44421015554321022103588999999999999854---998499827789616898347722
Q gi|254780991|r  231 YYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLE---RNDCIVVSSVSCIYGIGSVESYSQ  292 (805)
Q Consensus       231 ~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~---~~~~IVVgsrSAIfgl~~P~~~lg  292 (805)
T Consensus       119 -~~~~~~------------------e~q~~i~~~~~~~~~~~i~LvVVDSvaa~~----r~~~~~  160 (279)
T COG0468         119 -SQPDTG------------------EQQLEIAEKLARSGAEKIDLLVVDSVAALV----RAEEIE  160 (279)
T ss_pred             -ECCCCH------------------HHHHHHHHHHHHHCCCCCCEEEEECCCCCC----HHHHCC
T ss_conf             -668977------------------999999999987546887889982574346----365548