HHsearch alignment for GI: 254780991 and conserved domain: COG0653

>COG0653 SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion].

Probab=98.13  E-value=3.3e-05  Score=57.50  Aligned_cols=140  Identities=17%  Similarity=0.212  Sum_probs=100.1

Q ss_pred             CEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf             00013310168899999986302321246621478999999998635966873257645789999999973189869998
Q gi|254780991|r  559 VEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVG  638 (805)
Q Consensus       559 ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvg  638 (805)
T Consensus       406 ~vy~t~~~K~~Aiv~~I~~~~~~gqPvLvgT~sie~SE~ls~~L~~~~i~h~VLNAk~h~~EA~Iia~AG~~ga--VTiA  483 (822)
T COG0653         406 LVYKTEEEKFKAIVEDIKERHEKGQPVLVGTVSIEKSELLSKLLRKAGIPHNVLNAKNHAREAEIIAQAGQPGA--VTIA  483 (822)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCC--CCCC
T ss_conf             00352798899999999999965998897673142252677899864997404404367999998761278886--6316


Q ss_pred             HHHHHCCCCCCCCCEEE-EECCC---CCCCCCCHHHH--HHHHHHHCC-CCCCEEEEEECCCCHHHHHH
Q ss_conf             45875357877711799-96288---56744460137--766543127-99866999824898899999
Q gi|254780991|r  639 INLLREGLDIPECGLVA-ILDAD---KEGFLRSKTSL--IQTIGRAAR-NVNSKVILYADTITKSIQLA  700 (805)
Q Consensus       639 t~~~akGlD~p~v~lV~-i~dAD---~~~f~~~~~~~--~q~~GRagR-~~~G~~il~ad~~t~~~~~a  700 (805)
T Consensus       484 TNMAGRGTDIkLg~~~~~V~~lGGL~VIgTERhESRRIDnQLRGRsGRQGDpG~S~F~lSleD~L~r~F  552 (822)
T COG0653         484 TNMAGRGTDIKLGGNPEFVMELGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRRF  552 (822)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             532467752036897789997078568732542156777775045556899643310232389999873