HHsearch alignment for GI: 254780991 and conserved domain: COG1199

>COG1199 DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].
Probab=99.04  E-value=3.9e-07  Score=72.01  Aligned_cols=123  Identities=17%  Similarity=0.209  Sum_probs=82.6

Q ss_pred             CHHHHHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHHHHCCCE-EEECCCCCCHHHHHHHHHHHHCCCC-CEEEEHHHH
Q ss_conf             016889999998630232-1246621478999999998635966-8732576457899999999731898-699984587
Q gi|254780991|r  566 TQVEDVYDEINLAAQQGL-RILLTVLTKRMAEDLTEYLYERNIR-VRYMHSEVKTLERIEIIRDLRLGKF-DVLVGINLL  642 (805)
Q Consensus       566 ~qvddl~~ei~~~~~~~~-R~l~~~~tkr~~e~l~~~~~~~~i~-~~~~h~~~~~~~r~~il~~~~~g~~-diLvgt~~~  642 (805)
T Consensus       462 ~~~~~~~~~i~~~~~~~~~~~lvlF~Sy~~l~~~~~~~~~~~~~~~v~~q~---~~~~~~~l~~f~~~~~~~~lv~~gsf  538 (654)
T COG1199         462 ELLAKLAAYLREILKASPGGVLVLFPSYEYLKRVAERLKDERSTLPVLTQG---EDEREELLEKFKASGEGLILVGGGSF  538 (654)
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCC---CCCHHHHHHHHHHCCCCEEEEEECCE
T ss_conf             799999999999997479988999178999999999865116453344568---78469999999714786499972331


Q ss_pred             HCCCCCCCCCEEEEECCCCCCCCC----------------------------CHHHHHHHHHHHCCCC--CCEEEEEECC
Q ss_conf             535787771179996288567444----------------------------6013776654312799--8669998248
Q gi|254780991|r  643 REGLDIPECGLVAILDADKEGFLR----------------------------SKTSLIQTIGRAARNV--NSKVILYADT  692 (805)
Q Consensus       643 akGlD~p~v~lV~i~dAD~~~f~~----------------------------~~~~~~q~~GRagR~~--~G~~il~ad~  692 (805)
T Consensus       539 ~EGVD~~g~~l~~vvI~~lP-fp~p~dp~~~~r~~~~~~~g~~~f~~~~l~~A~~~l~QavGRlIR~~~D~G~ivllD~R  617 (654)
T COG1199         539 WEGVDFPGDALRLVVIVGLP-FPNPDDPLLKARLEFLKRLGGDPFEEFYLPPAVIKLRQAVGRLIRSEDDRGVIVLLDKR  617 (654)
T ss_pred             ECCEECCCCCEEEEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
T ss_conf             03151688765799998268-99899899999999998726997103458999999998743010478871699997153