HHsearch alignment for GI: 254780991 and conserved domain: COG1484

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=94.75  E-value=0.17  Score=29.74  Aligned_cols=67  Identities=22%  Similarity=0.314  Sum_probs=47.8

Q ss_pred             CCCCCCHHHHHHHHH---HHHHCCCCEEEEEEECCCCHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf             888884389999999---988739733799863376469999999997---19978999316346899999999867898
Q gi|254780991|r  147 YHPSGDQPAAIAQLL---KGIHSREKVQLLLGVTGSGKTFTMAKVIEA---MQRPAIVMAPNKILAAQLYSEFKNFFPHN  220 (805)
Q Consensus       147 ~~P~gdQ~~Ai~~L~---~~l~~g~~~qlL~GVTGSGKTevya~lI~~---~gr~aLvLvPei~La~QL~~rfk~~Fp~n  220 (805)
T Consensus        83 ~~~~-~~~~~l~~~~~~~~~~~~~-~nl~l~G~~G~GKthLa~Ai~~~l~~~g~sv~f~-----~~~el~~~Lk~~~~~~  155 (254)
T COG1484          83 FQPG-IDKKALEDLASLVEFFERG-ENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFI-----TAPDLLSKLKAAFDEG  155 (254)
T ss_pred             CCCH-HHHHHHHHHHHHHHHHCCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE-----EHHHHHHHHHHHHHCC
T ss_conf             8855-6699999999999873258-8289989999879999999999999839849998-----8599999999987455