HHsearch alignment for GI: 254780991 and conserved domain: KOG0243

>KOG0243 consensus.
Probab=95.66  E-value=0.0071  Score=40.04  Aligned_cols=94  Identities=20%  Similarity=0.341  Sum_probs=63.8

Q ss_pred             CCEEEEECCCCCCCHH----HHHHHHHHHHHCCCCEE-EEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Q ss_conf             7547751888888438----99999999887397337-998633764699999999971997899931634689999999
Q gi|254780991|r  139 TFFQMQTDYHPSGDQP----AAIAQLLKGIHSREKVQ-LLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEF  213 (805)
Q Consensus       139 ~~f~l~~~~~P~gdQ~----~Ai~~L~~~l~~g~~~q-lL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rf  213 (805)
T Consensus        95 k~ftFDkVFGpes~Q~d~Y~~~v~p~i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~---g~l~~~aGIIPRal~~I  171 (1041)
T KOG0243          95 KTFTFDKVFGPESQQEDLYDQAVSPIIKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKN---GELPSEAGIIPRALRQI  171 (1041)
T ss_pred             CEEECCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCC---CCCCCCCCCCHHHHHHH
T ss_conf             000011222752658999999988999998624772599864788885246236754345---88996578342999999


Q ss_pred             HHHCCCCEEEEE--EECCCCCCCC
Q ss_conf             986789838998--6213444421
Q gi|254780991|r  214 KNFFPHNAVEYF--VSYYDYYQPE  235 (805)
Q Consensus       214 k~~Fp~n~V~~f--~S~~~~yqpE  235 (805)
T Consensus       172 Fd~Le~~~~EYsvKVSfLELYNEE  195 (1041)
T KOG0243         172 FDTLEAQGAEYSVKVSFLELYNEE  195 (1041)
T ss_pred             HHHHHHCCCEEEEEEEEHHHHHHH
T ss_conf             999984488179998742654178