HHsearch alignment for GI: 254780991 and conserved domain: KOG0243
>KOG0243 consensus.
Probab=95.66 E-value=0.0071 Score=40.04 Aligned_cols=94 Identities=20% Similarity=0.341 Sum_probs=63.8
Q ss_pred CCEEEEECCCCCCCHH----HHHHHHHHHHHCCCCEE-EEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 7547751888888438----99999999887397337-998633764699999999971997899931634689999999
Q gi|254780991|r 139 TFFQMQTDYHPSGDQP----AAIAQLLKGIHSREKVQ-LLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEF 213 (805)
Q Consensus 139 ~~f~l~~~~~P~gdQ~----~Ai~~L~~~l~~g~~~q-lL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rf 213 (805)
T Consensus 95 k~ftFDkVFGpes~Q~d~Y~~~v~p~i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~---g~l~~~aGIIPRal~~I 171 (1041)
T KOG0243 95 KTFTFDKVFGPESQQEDLYDQAVSPIIKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKN---GELPSEAGIIPRALRQI 171 (1041)
T ss_pred CEEECCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCC---CCCCCCCCCCHHHHHHH
T ss_conf 000011222752658999999988999998624772599864788885246236754345---88996578342999999
Q ss_pred HHHCCCCEEEEE--EECCCCCCCC
Q ss_conf 986789838998--6213444421
Q gi|254780991|r 214 KNFFPHNAVEYF--VSYYDYYQPE 235 (805)
Q Consensus 214 k~~Fp~n~V~~f--~S~~~~yqpE 235 (805)
T Consensus 172 Fd~Le~~~~EYsvKVSfLELYNEE 195 (1041)
T KOG0243 172 FDTLEAQGAEYSVKVSFLELYNEE 195 (1041)
T ss_pred HHHHHHCCCEEEEEEEEHHHHHHH
T ss_conf 999984488179998742654178