HHsearch alignment for GI: 254780991 and conserved domain: KOG0354
>KOG0354 consensus.
Probab=99.88 E-value=2e-19 Score=164.03 Aligned_cols=458 Identities=17% Similarity=0.165 Sum_probs=224.2
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHH-HHHCCCCEEEEEEECCCCHHHHHHHHHHHC-----CCCEEEEECCHHHHHHHH
Q ss_conf 87754775188888843899999999-887397337998633764699999999971-----997899931634689999
Q gi|254780991|r 137 DITFFQMQTDYHPSGDQPAAIAQLLK-GIHSREKVQLLLGVTGSGKTFTMAKVIEAM-----QRPAIVMAPNKILAAQLY 210 (805)
Q Consensus 137 ~~~~f~l~~~~~P~gdQ~~Ai~~L~~-~l~~g~~~qlL~GVTGSGKTevya~lI~~~-----gr~aLvLvPei~La~QL~ 210 (805)
T Consensus 51 ~~~~~~~p~~~~lR~YQ~e----ivq~AL--g-kNtii~lPTG~GKTfIAa~Vm~nh~rw~p~~KiVF~aP~~pLv~QQ~ 123 (746)
T KOG0354 51 AAQRWIYPTNLELRNYQEE----LVQPAL--G-KNTIIALPTGSGKTFIAAVIMKNHFEWRPKGKVVFLAPTRPLVNQQI 123 (746)
T ss_pred HHCCCCCCCCCCCCHHHHH----HHHHHH--C-CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
T ss_conf 4144104676656078999----867862--6-87699953599861047999999972377643899607711788889
Q ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCH---HHHC-CCCC
Q ss_conf 99998678983899862134444210155543210221035889999999999998549984998277---8961-6898
Q gi|254780991|r 211 SEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSV---SCIY-GIGS 286 (805)
Q Consensus 211 ~rfk~~Fp~n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsr---SAIf-gl~~ 286 (805)
T Consensus 124 a~~~~~~~~~~~T~~l~~~--------~~~~~----------------r~~i~----~s~~vff~TpQil~ndL~~~~~~ 175 (746)
T KOG0354 124 ACFSIYLIPYSVTGQLGDT--------VPRSN----------------RGEIV----ASKRVFFRTPQILENDLKSGLHD 175 (746)
T ss_pred HHHHHCCCCCCCEEECCCC--------CCCCC----------------HHHHH----CCCCEEEECHHHHHHHCCCCCCC
T ss_conf 8876206760104550575--------68876----------------24531----02635896727634332543345
Q ss_pred HHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHCCCCCCHHHHHCCCC
Q ss_conf 347722579994198111787532343117656338775453318724783-1788877888731044420022210166
Q gi|254780991|r 287 VESYSQMIVQLKIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIE-IFPSHLEDVAWRVSMFGNDIEEISEFYP 365 (805)
Q Consensus 287 P~~~lglIIvdEehd~~~~~~~~~~l~~~~Y~R~D~a~~RG~f~~rg~ILd-satps~Es~~~Rie~f~deIe~I~~fDp 365 (805)
T Consensus 176 ~ls~fs~iv~DE~Hra~kn~~---------Y~~Vmr~-~l~~k~~~~qILgLTASpG~~-~~~v~~~I~~L~asldvr~~ 244 (746)
T KOG0354 176 ELSDFSLIVFDECHRTSKNHP---------YNNIMRE-YLDLKNQGNQILGLTASPGSK-LEQVQNVIDNLCASLDVRTE 244 (746)
T ss_pred CCCEEEEEEECCCCCCCCCCC---------HHHHHHH-HHHHHHCCCCEEEEECCCCCC-HHHHHHHHHHHHEECCCCHH
T ss_conf 455179999722244555661---------7999999-998651466179985588845-89999999852033255504
Q ss_pred CC-CCHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCCC
Q ss_conf 64-00111000010000000025636788754558998998998875443321100124444---777753321120145
Q gi|254780991|r 366 LT-GQKIRNVETIKIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRI---TYDLEMLETTGSCQS 441 (805)
Q Consensus 366 lT-~~~~~~~~~~~i~Pa~~~v~~~e~l~~a~~~i~~el~~rl~~~~~~~~~~ea~rL~qR~---~~dle~l~e~G~~~g 441 (805)
T Consensus 245 ssi~~~y~~lr~~~~i~v-------~-~~~~~~~~~~~f~~~i~p~l~~l~~~~l~~~~~~~~~~~~~~~~~~~------ 310 (746)
T KOG0354 245 SSIKSNYEELREHVQIPV-------D-LSLCERDIEDPFGMIIEPLLQQLQEEGLIEISDKSTSYEQWVVQAEK------ 310 (746)
T ss_pred HHHHHHHHHHHCCCCCCC-------C-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH------
T ss_conf 456541898724675247-------5-88764113436999999999999863854102433344440433002------
Q ss_pred CCHHHHHHCCCCCCCCC--HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 10113331144655562--0233026544213210123447544543245654133323576655444322211101001
Q gi|254780991|r 442 IENYSRYLTGRNPGEPP--PTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWN 519 (805)
Q Consensus 442 ienyS~~L~~r~~ge~P--~tL~dY~p~d~ll~idesh~~~pqi~~~~~~d~~RK~~l~~~gfrlp~~~~n~pl~f~e~~ 519 (805)
T Consensus 311 ----~~~~~~~~--~q~~~f~~~~~~~~~~-------------------------~ll~~~gir~~~~l~~~~~f~~e~~ 359 (746)
T KOG0354 311 ----AAAPNGPE--NQRNCFYALHLRKYNL-------------------------ALLISDGIRFVDALDYLEDFYEEVA 359 (746)
T ss_pred ----HHCCCCCC--CCHHHHHHHHHHHHHH-------------------------HHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf ----22368874--3203678999998788-------------------------8876323403777765554300000
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHH-HCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 21555454446867542013220023432-01244677200001331016889999998630232124662147899999
Q gi|254780991|r 520 CLRPTTIVVSATPGSWELEQCQGIIVEQI-IRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDL 598 (805)
Q Consensus 520 ~~~~~~~~~satPg~~e~e~~~~~~~eqi-~rptg~idp~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l 598 (805)
T Consensus 360 ~~k~~~~~~e~~~--------~~~~~~~m~~~~~l~~~~~-~~npkle~l~~~l~e~f~-~~~dsR~IIFve~R~sa~~l 429 (746)
T KOG0354 360 LKKYLKLELEARL--------IRNFTENMNELEHLSLDPP-KENPKLEKLVEILVEQFE-QNPDSRTIIFVETRESALAL 429 (746)
T ss_pred HHHHHHHHHCCHH--------HHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHH-CCCCCCEEEEEEHHHHHHHH
T ss_conf 4678898742210--------6778898876443202787-668469999999999860-59885079997328899999
Q ss_pred HHHHH---HCCCEEEECCC--------CCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 99986---35966873257--------64578999999997318986999845875357877711799962885674446
Q gi|254780991|r 599 TEYLY---ERNIRVRYMHS--------EVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRS 667 (805)
Q Consensus 599 ~~~~~---~~~i~~~~~h~--------~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~~~f~~~ 667 (805)
T Consensus 430 ~~~l~~~~~~~ir~~~fiGq~~s~~~~gmtqk~Q~evl~~Fr~G~~NvLVATSV~EEGLDI~ec~lVIcYd-----~~sn 504 (746)
T KOG0354 430 KKWLLQLHELGIKAEIFIGQGKSTQSTGMTQKEQKEVLDKFRDGEINVLVATSVAEEGLDIGECNLVICYD-----YSSN 504 (746)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCEEEEEC-----CCCC
T ss_conf 99997540135440215603544544445789999999998579802799810100467742112899965-----7766
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH
Q ss_conf 0137766543127998669998248988999999
Q gi|254780991|r 668 KTSLIQTIGRAARNVNSKVILYADTITKSIQLAI 701 (805)
Q Consensus 668 ~~~~~q~~GRagR~~~G~~il~ad~~t~~~~~ai 701 (805)
T Consensus 505 pIrmIQrrGR-gRa~ns~~vll~t~~~~~~~E~~ 537 (746)
T KOG0354 505 PIRMVQRRGR-GRARNSKCVLLTTGSEVIEFERN 537 (746)
T ss_pred HHHHHHHHCC-CCCCCCEEEEEECCHHHHHHHHH
T ss_conf 8899998631-01018769999725168899888