HHsearch alignment for GI: 254780991 and conserved domain: KOG1000
>KOG1000 consensus.
Probab=96.95 E-value=0.041 Score=34.38 Aligned_cols=120 Identities=14% Similarity=0.197 Sum_probs=94.8
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCC-CC-EEEEHHHHHCCCCCCCCCEEE
Q ss_conf 6302321246621478999999998635966873257645789999999973189-86-999845875357877711799
Q gi|254780991|r 578 AAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGK-FD-VLVGINLLREGLDIPECGLVA 655 (805)
Q Consensus 578 ~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~-~d-iLvgt~~~akGlD~p~v~lV~ 655 (805)
T Consensus 488 ~d~~~~KflVFaHH~~vLd~Iq~~~~~r~vg~IRIDGst~s~~R~ll~qsFQ~seev~VAvlsItA~gvGLt~tAa~~VV 567 (689)
T KOG1000 488 PDAPPRKFLVFAHHQIVLDTIQVEVNKRKVGSIRIDGSTPSHRRTLLCQSFQTSEEVRVAVLSITAAGVGLTLTAASVVV 567 (689)
T ss_pred CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCEEE
T ss_conf 56887359999414879999999998747975885698984347899987314631479999986314441465132589
Q ss_pred EECCCCCCCCCCHHHHHHHHHHHCC-CCCCEEE---EEE-CCCCHHHHHHHH
Q ss_conf 9628856744460137766543127-9986699---982-489889999999
Q gi|254780991|r 656 ILDADKEGFLRSKTSLIQTIGRAAR-NVNSKVI---LYA-DTITKSIQLAID 702 (805)
Q Consensus 656 i~dAD~~~f~~~~~~~~q~~GRagR-~~~G~~i---l~a-d~~t~~~~~ai~ 702 (805)
T Consensus 568 FaE-----L~wnPgvLlQAEDRaHRiGQkssV~v~ylvAKgT~Ddy~Wp~l~ 614 (689)
T KOG1000 568 FAE-----LHWNPGVLLQAEDRAHRIGQKSSVFVQYLVAKGTADDYMWPMLQ 614 (689)
T ss_pred EEE-----ECCCCCEEEECHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHH
T ss_conf 998-----23787547751465664056651138999954845777789999