HHsearch alignment for GI: 254780991 and conserved domain: PHA00350

>PHA00350 putative assembly protein.
Probab=91.85  E-value=0.13  Score=30.72  Aligned_cols=53  Identities=25%  Similarity=0.336  Sum_probs=33.5

Q ss_pred             EEEEEEECCCCHHH--HHHHHHHH--CCCCEEEEECCHHHHHHHHHHHHHHCCC---CEEEEEEE
Q ss_conf             37998633764699--99999997--1997899931634689999999986789---83899862
Q gi|254780991|r  170 VQLLLGVTGSGKTF--TMAKVIEA--MQRPAIVMAPNKILAAQLYSEFKNFFPH---NAVEYFVS  227 (805)
Q Consensus       170 ~qlL~GVTGSGKTe--vya~lI~~--~gr~aLvLvPei~La~QL~~rfk~~Fp~---n~V~~f~S  227 (805)
T Consensus         3 I~~~~G~pGSyKS~~av~~~ilPALk~GR~ViTNi~g--l---~le~i~k~~~~~p~~~~liri~   62 (402)
T PHA00350          3 IYAIVGRPGSYKSYEAVVYHIIPALKDGRKVITNIPG--L---NLDVFEKVFGEFPDTAELIRIV   62 (402)
T ss_pred             EEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEECCCC--C---CHHHHHHHCCCCCCCHHEEEEE
T ss_conf             7998259999766011086768898569989977899--8---8899998717883603227874