HHsearch alignment for GI: 254780991 and conserved domain: PHA00350
>PHA00350 putative assembly protein.
Probab=91.85 E-value=0.13 Score=30.72 Aligned_cols=53 Identities=25% Similarity=0.336 Sum_probs=33.5
Q ss_pred EEEEEEECCCCHHH--HHHHHHHH--CCCCEEEEECCHHHHHHHHHHHHHHCCC---CEEEEEEE
Q ss_conf 37998633764699--99999997--1997899931634689999999986789---83899862
Q gi|254780991|r 170 VQLLLGVTGSGKTF--TMAKVIEA--MQRPAIVMAPNKILAAQLYSEFKNFFPH---NAVEYFVS 227 (805)
Q Consensus 170 ~qlL~GVTGSGKTe--vya~lI~~--~gr~aLvLvPei~La~QL~~rfk~~Fp~---n~V~~f~S 227 (805)
T Consensus 3 I~~~~G~pGSyKS~~av~~~ilPALk~GR~ViTNi~g--l---~le~i~k~~~~~p~~~~liri~ 62 (402)
T PHA00350 3 IYAIVGRPGSYKSYEAVVYHIIPALKDGRKVITNIPG--L---NLDVFEKVFGEFPDTAELIRIV 62 (402)
T ss_pred EEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEECCCC--C---CHHHHHHHCCCCCCCHHEEEEE
T ss_conf 7998259999766011086768898569989977899--8---8899998717883603227874