HHsearch alignment for GI: 254780991 and conserved domain: PRK04914
>PRK04914 ATP-dependent helicase HepA; Validated.
Probab=99.58 E-value=2.2e-10 Score=96.29 Aligned_cols=128 Identities=20% Similarity=0.215 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHHHCCC--CCEEEEHHHHH
Q ss_conf 16889999998630232124662147899999999863-5966873257645789999999973189--86999845875
Q gi|254780991|r 567 QVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYE-RNIRVRYMHSEVKTLERIEIIRDLRLGK--FDVLVGINLLR 643 (805)
Q Consensus 567 qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~-~~i~~~~~h~~~~~~~r~~il~~~~~g~--~diLvgt~~~a 643 (805)
T Consensus 480 rv~~Li~~Lk~~--~~eKvLVFte~~~Ta~~L~~~Lr~~~Gi~~avfh~gms~~ERdraaa~Fa~~e~gaqVLI~TEags 557 (955)
T PRK04914 480 RVEWLIDFLKSH--RSEKVLVICAKAETALQLEQALREREGIRAAVFHEGMSIIERDRAAAYFADEEDGAQVLLCSEIGS 557 (955)
T ss_pred HHHHHHHHHHHC--CCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 999999999857--798589996838999999999987559956997099998999999998617677851999725212
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHHHHHHH
Q ss_conf 3578777117999628856744460137766543127-998669998248988999999
Q gi|254780991|r 644 EGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKSIQLAI 701 (805)
Q Consensus 644 kGlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~~~~ai 701 (805)
T Consensus 558 EG~NLQF~~~LVnyD-----LPWNP~rLEQRIGRlDRiGQ~~dV~Ihvpy~~~s~q~~l 611 (955)
T PRK04914 558 EGRNFQFASHLVLFD-----LPFNPDLLEQRIGRLDRIGQKHDIQIHVPYLEGTAQERL 611 (955)
T ss_pred CCCCHHHHHHHEECC-----CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
T ss_conf 450377743523525-----898765889985206542786750798620289889999