HHsearch alignment for GI: 254780991 and conserved domain: PRK05298
>PRK05298 excinuclease ABC subunit B; Provisional.
Probab=100.00 E-value=0 Score=1635.42 Aligned_cols=653 Identities=64% Similarity=1.017 Sum_probs=637.3
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC
Q ss_conf 77547751888888438999999998873973379986337646999999999719978999316346899999999867
Q gi|254780991|r 138 ITFFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFF 217 (805)
Q Consensus 138 ~~~f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rfk~~F 217 (805)
T Consensus 3 ~~~F~l~s~~~P~GDQP~AI~~L~~gi~~g~~~Q~LlGvTGSGKTfTmAnvI~~~~rPtLVlahNKTLAAQLy~Efk~fF 82 (657)
T PRK05298 3 MKPFKLVSPYKPAGDQPQAIAELVEGIESGEKHQTLLGVTGSGKTFTMANVIARVQRPTLVLAHNKTLAAQLYGEFKEFF 82 (657)
T ss_pred CCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHC
T ss_conf 88822688899999879999999989974996369970367856689999999868975997665889999999999768
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHCCEEEE
Q ss_conf 89838998621344442101555432102210358899999999999985499849982778961689834772257999
Q gi|254780991|r 218 PHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQL 297 (805)
Q Consensus 218 p~n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIfgl~~P~~~lglIIvd 297 (805)
T Consensus 83 P~NaVEYFVSYyDYYQPEAYip~tDtYIEKdssIN~eId~lR~sAT~SLl~RrDVIVVASVSCIYGLGsPe~Y~~~~l~l 162 (657)
T PRK05298 83 PENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINEEIERLRLSATKSLLERRDVIVVASVSCIYGLGSPEEYLKMVLHL 162 (657)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHCEEEE
T ss_conf 88717998514456697111478885242363466999999999999885479869997367616899979997343777
Q ss_pred ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCC
Q ss_conf 41981117875323431176563387754533187247831788877888731044420022210166640011100001
Q gi|254780991|r 298 KIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETI 377 (805)
Q Consensus 298 Eehd~~~~~~~~~~l~~~~Y~R~D~a~~RG~f~~rg~ILdsatps~Es~~~Rie~f~deIe~I~~fDplT~~~~~~~~~~ 377 (805)
T Consensus 163 ~~G~~i~r~~ll~~LV~~qY~RnD~~~~RG~FRVrGDvVdI~Pa~~ed~aiRIeffgDeIE~I~~~Dpltg~~i~~~~~~ 242 (657)
T PRK05298 163 RVGQEIDRRELLRRLVELQYERNDIDFQRGTFRVRGDVIDIFPAEYEDRAIRIEFFGDEIERISEFDPLTGEVLGELDRV 242 (657)
T ss_pred ECCCEECHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCEE
T ss_conf 58977179999999998287767651168555773664788337777616999995780628999827788352433349
Q ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 00000000256367887545589989989988754433211001244447777533211201451011333114465556
Q gi|254780991|r 378 KIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEP 457 (805)
Q Consensus 378 ~i~Pa~~~v~~~e~l~~a~~~i~~el~~rl~~~~~~~~~~ea~rL~qR~~~dle~l~e~G~~~gienyS~~L~~r~~ge~ 457 (805)
T Consensus 243 ~IfPAshyVt~~e~l~~Ai~~I~~EL~eRl~~f~~~gKllEAqRL~qRT~yDlEMl~E~GyCsGIENYSRhl~gR~pGe~ 322 (657)
T PRK05298 243 TIYPASHYVTPRERLERAIESIKEELEERLKELEKEGKLLEAQRLEQRTRYDLEMLRELGYCSGIENYSRHLSGRAPGEP 322 (657)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
T ss_conf 98178676899799999999999999999999997677798889999988799999982877560121565069998878
Q ss_pred CHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 20233026544213210123447544543245654133323576655444322211101001215554544468675420
Q gi|254780991|r 458 PPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWEL 537 (805)
Q Consensus 458 P~tL~dY~p~d~ll~idesh~~~pqi~~~~~~d~~RK~~l~~~gfrlp~~~~n~pl~f~e~~~~~~~~~~~satPg~~e~ 537 (805)
T Consensus 323 P~tLlDYfp~DfLl~iDESHvtvPQi~gMy~GDrsRK~~LVe~GFRLPSAlDNRPL~feEFe~~~~q~iyVSATPg~yEl 402 (657)
T PRK05298 323 PPTLLDYFPDDFLLFIDESHVTVPQIGGMYNGDRSRKETLVEYGFRLPSALDNRPLKFEEFEAKVPQTIYVSATPGDYEL 402 (657)
T ss_pred CCHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHH
T ss_conf 94488757756599983211240878878623157788898705778723348997889999744877999569858988
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 13220023432012446772000013310168899999986302321246621478999999998635966873257645
Q gi|254780991|r 538 EQCQGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVK 617 (805)
Q Consensus 538 e~~~~~~~eqi~rptg~idp~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~ 617 (805)
T Consensus 403 ~~s-~~vvEQiIRPTGLlDP~ievrp~~~Qiddl~~ei~~~~~~~er~LvttlTkkmaEdLt~yl~~~~ik~~YlHs~i~ 481 (657)
T PRK05298 403 EKS-GQVVEQIIRPTGLLDPEIEVRPTKGQVDDLLSEIRKRVAKGERVLVTTLTKRMAEDLTDYLKELGIKVRYLHSDID 481 (657)
T ss_pred HHC-CCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 736-6734577778878798459964878799999999999636976999954598999999999967980799626661
Q ss_pred HHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
Q ss_conf 78999999997318986999845875357877711799962885674446013776654312799866999824898899
Q gi|254780991|r 618 TLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAARNVNSKVILYADTITKSI 697 (805)
Q Consensus 618 ~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR~~~G~~il~ad~~t~~~ 697 (805)
T Consensus 482 t~eR~eIl~~LR~G~~DVlVGINLLREGLDlPEVSLVaILDADKeGFLRs~~SLiQtiGRAARN~~G~vIlYAD~iT~SM 561 (657)
T PRK05298 482 TLERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKVILYADKITDSM 561 (657)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHH
T ss_conf 88999999998588875897500220457876135798870685221035205999987886257974999815450999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999878888888876887188530234667776656665555555543333431279788999999999999999974
Q gi|254780991|r 698 QLAIDETTRRREKQLEHNKKHNINPQSVKEKIMEVIDPILLEDAATTNISIDAQQLSLSKKKGKAHLKSLRKQMHLAADN 777 (805)
Q Consensus 698 ~~ai~e~~rrr~~q~~~n~~~~i~p~~i~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~m~~aa~~ 777 (805)
T Consensus 562 ~~ai~ET~rRR~iQ~~yN~~h~ItP~tI~K~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~l~~~M~~aA~~ 634 (657)
T PRK05298 562 QKAIDETERRREIQIAYNEEHGITPKTIKKKIRDILDGVYEEEAD-------AKAEKMSKKELEKLIKKLEKQMKEAAKN 634 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH-------HHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998999999999956998643163325454132210000-------1101379899999999999999999984
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 148999999999999999973
Q gi|254780991|r 778 LNFEEAARIRDEIKRLKSSPY 798 (805)
Q Consensus 778 l~fE~Aa~lRD~i~~l~~~~~ 798 (805)
T Consensus 635 l~FE~Aa~lRD~i~~l~~~~~ 655 (657)
T PRK05298 635 LEFEEAARLRDEIKELKEQLL 655 (657)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
T ss_conf 799999998999999999871