HHsearch alignment for GI: 254780991 and conserved domain: PRK06995
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=95.34 E-value=0.1 Score=31.47 Aligned_cols=84 Identities=24% Similarity=0.184 Sum_probs=47.8
Q ss_pred EEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHC
Q ss_conf 37998633764699999999971997899931634689999999986789838998621344442101555432102210
Q gi|254780991|r 170 VQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKES 249 (805)
Q Consensus 170 ~qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rfk~~Fp~n~V~~f~S~~~~yqpEay~p~~d~~i~k~~ 249 (805)
T Consensus 178 V~alVGPTGVGKTTTiAKLAA---------------------r~~l~~g~~kVaLI--------------T~DTY----- 217 (404)
T PRK06995 178 VFALVGPTGVGKTTTTAKLAA---------------------RCVMRHGASKVALL--------------TTDSY----- 217 (404)
T ss_pred EEEEECCCCCCHHHHHHHHHH---------------------HHHHHHCCCCEEEE--------------ECCCC-----
T ss_conf 589866888763758999999---------------------99998389837999--------------76875-----
Q ss_pred CCCHHHHHHHHHHHHHHHC-----CCCEEEECCHHHHCCCCCHHHHHCCEEEEECCCC
Q ss_conf 3588999999999999854-----9984998277896168983477225799941981
Q gi|254780991|r 250 SINEQIDRMRHSATRSLLE-----RNDCIVVSSVSCIYGIGSVESYSQMIVQLKIGDS 302 (805)
Q Consensus 250 s~n~~i~~~R~~a~~~l~~-----~~~~IVVgsrSAIfgl~~P~~~lglIIvdEehd~ 302 (805)
T Consensus 218 ---------RIgAvEQLktYa~IlgvPv~vv~~~~eL~~aL~~l~~~dlILIDTaGrs 266 (404)
T PRK06995 218 ---------RIGGHEQLRIYGKILGVPVHAVKDAADLRLALAELRNKHIVLIDTVGMS 266 (404)
T ss_pred ---------CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf ---------4789999999998759559995999999999997089999998099989