HHsearch alignment for GI: 254780991 and conserved domain: PRK07246

>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=98.87  E-value=1.9e-05  Score=59.32  Aligned_cols=121  Identities=21%  Similarity=0.254  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCC
Q ss_conf             88999999863023212466214789999999986359668732576457899999999731898699984587535787
Q gi|254780991|r  569 EDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDI  648 (805)
Q Consensus       569 ddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~  648 (805)
T Consensus       634 ~~la~~i~~l~~~~g~~LVLFTS~~~l~~v~~~L~~~~~~~L~Qg---~~gs~~~l~~rF~~~~~siLlGt~SFWEGVDl  710 (820)
T PRK07246        634 EAIAKRLESLKQEGQPILVLFNSKKHLLAVSDYLDQWQVSHLAQE---KNGTAYNIKKRFDRGEQTILLGLGSFWEGVDF  710 (820)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEC---CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf             999999999997499999995309999999999853799778867---97679999999984899699976676466448


Q ss_pred             CC--CCEEEEECCC--CCCCC----C----------CHH---------HHHHHHHHHCCCC--CCEEEEEECC
Q ss_conf             77--1179996288--56744----4----------601---------3776654312799--8669998248
Q gi|254780991|r  649 PE--CGLVAILDAD--KEGFL----R----------SKT---------SLIQTIGRAARNV--NSKVILYADT  692 (805)
Q Consensus       649 p~--v~lV~i~dAD--~~~f~----~----------~~~---------~~~q~~GRagR~~--~G~~il~ad~  692 (805)
T Consensus       711 pG~~L~~vVI~kLPF~~P~dPl~~a~~~~l~~~G~npF~~~~LP~AvlrlkQg~GRLIRs~~DrGvvvIlD~R  783 (820)
T PRK07246        711 IQADRMIEVITRLPFDNPEDPFVKKMSQYLLEEGKNPFYDYFLPMTILRLKQAIGRTMRREDQKSAVIILDRR  783 (820)
T ss_pred             CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
T ss_conf             9987799998869999998099999999999828995256229999999999570367679986899998886