HHsearch alignment for GI: 254780991 and conserved domain: PRK07246
>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=98.87 E-value=1.9e-05 Score=59.32 Aligned_cols=121 Identities=21% Similarity=0.254 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCC
Q ss_conf 88999999863023212466214789999999986359668732576457899999999731898699984587535787
Q gi|254780991|r 569 EDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDI 648 (805)
Q Consensus 569 ddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~ 648 (805)
T Consensus 634 ~~la~~i~~l~~~~g~~LVLFTS~~~l~~v~~~L~~~~~~~L~Qg---~~gs~~~l~~rF~~~~~siLlGt~SFWEGVDl 710 (820)
T PRK07246 634 EAIAKRLESLKQEGQPILVLFNSKKHLLAVSDYLDQWQVSHLAQE---KNGTAYNIKKRFDRGEQTILLGLGSFWEGVDF 710 (820)
T ss_pred HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEC---CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 999999999997499999995309999999999853799778867---97679999999984899699976676466448
Q ss_pred CC--CCEEEEECCC--CCCCC----C----------CHH---------HHHHHHHHHCCCC--CCEEEEEECC
Q ss_conf 77--1179996288--56744----4----------601---------3776654312799--8669998248
Q gi|254780991|r 649 PE--CGLVAILDAD--KEGFL----R----------SKT---------SLIQTIGRAARNV--NSKVILYADT 692 (805)
Q Consensus 649 p~--v~lV~i~dAD--~~~f~----~----------~~~---------~~~q~~GRagR~~--~G~~il~ad~ 692 (805)
T Consensus 711 pG~~L~~vVI~kLPF~~P~dPl~~a~~~~l~~~G~npF~~~~LP~AvlrlkQg~GRLIRs~~DrGvvvIlD~R 783 (820)
T PRK07246 711 IQADRMIEVITRLPFDNPEDPFVKKMSQYLLEEGKNPFYDYFLPMTILRLKQAIGRTMRREDQKSAVIILDRR 783 (820)
T ss_pred CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
T ss_conf 9987799998869999998099999999999828995256229999999999570367679986899998886