HHsearch alignment for GI: 254780991 and conserved domain: PRK08116

Probab=95.79  E-value=0.051  Score=33.65  Aligned_cols=68  Identities=19%  Similarity=0.294  Sum_probs=46.2

Q ss_pred             CCCCCCHHHHHHH---HHHHHHC-CC--CEEEEEEECCCCHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHHHHHHHC
Q ss_conf             8888843899999---9998873-97--33799863376469999999997---19978999316346899999999867
Q gi|254780991|r  147 YHPSGDQPAAIAQ---LLKGIHS-RE--KVQLLLGVTGSGKTFTMAKVIEA---MQRPAIVMAPNKILAAQLYSEFKNFF  217 (805)
Q Consensus       147 ~~P~gdQ~~Ai~~---L~~~l~~-g~--~~qlL~GVTGSGKTevya~lI~~---~gr~aLvLvPei~La~QL~~rfk~~F  217 (805)
T Consensus        81 ~~~~~~~~~a~~~a~~Y~~~f~~~~~~~~GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~-----~~~~ll~~lk~~~  155 (262)
T PRK08116         81 WLFRKGSEKAYKVAVKYVKKFEEMKKESVGLLLWGSPGNGKTYLAAAIANELIEKGVPVVFV-----NVPELLNRIKSTY  155 (262)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE-----EHHHHHHHHHHHH
T ss_conf             56895259999999999998987364686189989899989999999999999879939998-----8999999999998


Q ss_pred             CC
Q ss_conf             89
Q gi|254780991|r  218 PH  219 (805)
Q Consensus       218 p~  219 (805)
T Consensus       156 ~~  157 (262)
T PRK08116        156 NS  157 (262)
T ss_pred             HC
T ss_conf             63