HHsearch alignment for GI: 254780991 and conserved domain: PRK09694
>PRK09694 hypothetical protein; Provisional.
Probab=99.47 E-value=7e-11 Score=100.03 Aligned_cols=357 Identities=13% Similarity=0.103 Sum_probs=193.6
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHC-----CCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 4775188888843899999999887397337998633764699999999971-----99789993163468999999998
Q gi|254780991|r 141 FQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAM-----QRPAIVMAPNKILAAQLYSEFKN 215 (805)
Q Consensus 141 f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~-----gr~aLvLvPei~La~QL~~rfk~ 215 (805)
T Consensus 276 ~~~~~~~l~~~~~PrplQ~~~~~l~~~PgL~IiEAptG~GKTEAAL~~A~~L~~~~~~~Gl~faLPT~ATaNaMf~Rv~~ 355 (878)
T PRK09694 276 YGGVHALLDNGYQPRQLQTLVDALPLAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEA 355 (878)
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 65413331789999679999984567998799975899975899999999999734898369977479889999999999
Q ss_pred ----HCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCC---CCEEEECCHHHHCCCCCHH
Q ss_conf ----678983899862134444210155543210221035889999999999998549---9849982778961689834
Q gi|254780991|r 216 ----FFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLER---NDCIVVSSVSCIYGIGSVE 288 (805)
Q Consensus 216 ----~Fp~n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~---~~~IVVgsrSAIfgl~~P~ 288 (805)
T Consensus 356 ~~~~~~~~~~v~LaHg~a~l~~~~~~l~~~~~~~~-----~~~~~~~~~~~W~~~~~Kr~LLap~~VGTiDQaLla~L~~ 430 (878)
T PRK09694 356 AASKLFPSPNLILAHGNSRFNHLFQSIKSRAITEQ-----GQEEAWVQCCQWLSQSNKRVFLGQIGVCTIDQVLISVLPV 430 (878)
T ss_pred HHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCC-----CCCCHHHHHHHHHCCCHHHHHCCCCEECCHHHHHHHHHCC
T ss_conf 99973689976974473655056665101367654-----4543015777664111022313771546799999987461
Q ss_pred H--HH-------CCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCHHH
Q ss_conf 7--72-------25799941981117875323431176563387754533187247831788877888731044420022
Q gi|254780991|r 289 S--YS-------QMIVQLKIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEE 359 (805)
Q Consensus 289 ~--~l-------glIIvdEehd~~~~~~~~~~l~~~~Y~R~D~a~~RG~f~~rg~ILdsatps~Es~~~Rie~f~deIe~ 359 (805)
T Consensus 431 kH~~LR~~gLa~kvvIiDEVHAY---D~Ym~-----~lL~-~lL~wl~~~g-~~viLLSATLP~~~---R---------- 487 (878)
T PRK09694 431 KHRFIRGLGIGRSVLIVDEVHAY---DAYMN-----GLLE-AVLKAQAQVG-GSVILLSATLPMTQ---K---------- 487 (878)
T ss_pred CHHHHHHHHHCCCEEEEECCCCC---CHHHH-----HHHH-HHHHHHHHCC-CCEEEEECCCCHHH---H----------
T ss_conf 48999999862874897253334---58899-----9999-9999999839-98899927898999---9----------
Q ss_pred HHCCCCCCCCHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 21016664001110000100000000256367887545589989989988754433211001244447777533211201
Q gi|254780991|r 360 ISEFYPLTGQKIRNVETIKIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSC 439 (805)
Q Consensus 360 I~~fDplT~~~~~~~~~~~i~Pa~~~v~~~e~l~~a~~~i~~el~~rl~~~~~~~~~~ea~rL~qR~~~dle~l~e~G~~ 439 (805)
T Consensus 488 ------------------------------~~L~~ay-----------------~----------------------~~~ 498 (878)
T PRK09694 488 ------------------------------QKLLDTY-----------------G----------------------LHT 498 (878)
T ss_pred ------------------------------HHHHHHH-----------------C----------------------CCC
T ss_conf ------------------------------9999975-----------------5----------------------688
Q ss_pred CCCCHHHHHHCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 45101133311446555620233026544213210123447544543245654133323576655444322211101001
Q gi|254780991|r 440 QSIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWN 519 (805)
Q Consensus 440 ~gienyS~~L~~r~~ge~P~tL~dY~p~d~ll~idesh~~~pqi~~~~~~d~~RK~~l~~~gfrlp~~~~n~pl~f~e~~ 519 (805)
T Consensus 499 ~-------------~-~~~~~---~YP--~it~~~~--~~~~~~---------------------~~~~~---------- 526 (878)
T PRK09694 499 D-------------P-VENNS---AYP--LINWRGV--NGAQRF---------------------DLLAH---------- 526 (878)
T ss_pred C-------------C-CCCCC---CCC--EEEECCC--CCCCCC---------------------CCCCC----------
T ss_conf 7-------------6-66677---886--1363155--666753---------------------44655----------
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 21555454446867542013220023432012446772000013310168899999986302321246621478999999
Q gi|254780991|r 520 CLRPTTIVVSATPGSWELEQCQGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLT 599 (805)
Q Consensus 520 ~~~~~~~~~satPg~~e~e~~~~~~~eqi~rptg~idp~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~ 599 (805)
T Consensus 527 ----------~~~~~~-----------~v~~~~~~~~~~-------~~~~~~~~~l~~~~~~G~~v~vI~NTV~rAq~~y 578 (878)
T PRK09694 527 ----------QLPPRF-----------SIQPEPICLADM-------LPDLTMLERMIAAANAGAQVCVICNLVDDAQVCY 578 (878)
T ss_pred ----------CCCCCC-----------EEEEEEEECCCC-------CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
T ss_conf ----------567772-----------378887631444-------7648999999999978995999938899999999
Q ss_pred HHHHHC---CCEEEECCCCCCHHHHHH----HHHHHHCC----CCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCCCH
Q ss_conf 998635---966873257645789999----99997318----9869998458753578777117999628856744460
Q gi|254780991|r 600 EYLYER---NIRVRYMHSEVKTLERIE----IIRDLRLG----KFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSK 668 (805)
Q Consensus 600 ~~~~~~---~i~~~~~h~~~~~~~r~~----il~~~~~g----~~diLvgt~~~akGlD~p~v~lV~i~dAD~~~f~~~~ 668 (805)
T Consensus 579 ~~L~~~~~~~~~v~L~HsRF~~~DR~~~E~~vl~~~Gk~~~r~~g~IlVaTQVvEQSLDiDfD~liT--------DLAPi 650 (878)
T PRK09694 579 QRLKELNNTQVDIDLFHARFTFNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDLDFDWLIT--------QHCPA 650 (878)
T ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCHHHC--------CCCCH
T ss_conf 9999852899877998688877669999999999868898899986999773332430335330110--------46869
Q ss_pred HHHHHHHHHHCCCC
Q ss_conf 13776654312799
Q gi|254780991|r 669 TSLIQTIGRAARNV 682 (805)
Q Consensus 669 ~~~~q~~GRagR~~ 682 (805)
T Consensus 651 DlLlQR~GRLhRH~ 664 (878)
T PRK09694 651 DLLFQRMGRLHRHH 664 (878)
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99998742320589