HHsearch alignment for GI: 254780991 and conserved domain: PRK11634
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=100.00 E-value=9.8e-33 Score=263.72 Aligned_cols=121 Identities=19% Similarity=0.314 Sum_probs=112.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCC
Q ss_conf 32124662147899999999863596687325764578999999997318986999845875357877711799962885
Q gi|254780991|r 582 GLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADK 661 (805)
Q Consensus 582 ~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~ 661 (805)
T Consensus 245 ~~~~IIF~~Tk~~~~~l~~~L~~~g~~~~~LHgdm~q~~R~~~l~~Fr~g~~~ILVaTDvaARGLDi~~V~~VINyD--- 321 (629)
T PRK11634 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYD--- 321 (629)
T ss_pred CCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEC---
T ss_conf 88489998227889999999997699657656899999999999999759998898786210557725688899968---
Q ss_pred CCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 6744460137766543127-998669998248988999999987888888
Q gi|254780991|r 662 EGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKSIQLAIDETTRRREK 710 (805)
Q Consensus 662 ~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~~~~ai~e~~rrr~~ 710 (805)
T Consensus 322 --lP~d~e~YVHRiGRTGRaGr~G~Aitf---v~~~e~~~l~~ier~~~~ 366 (629)
T PRK11634 322 --IPMDSESYVHRIGRTGRAGRAGRALLF---VENRERRLLRNIERTMKL 366 (629)
T ss_pred --CCCCHHHCCCCCCCCCCCCCCEEEEEE---ECHHHHHHHHHHHHHHCC
T ss_conf --989743401025833168996469998---888999999999999779