HHsearch alignment for GI: 254780991 and conserved domain: PRK12326
>PRK12326 preprotein translocase subunit SecA; Reviewed.
Probab=98.72 E-value=2.5e-06 Score=65.94 Aligned_cols=147 Identities=20% Similarity=0.219 Sum_probs=109.6
Q ss_pred CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 1244677-200001331016889999998630232124662147899999999863596687325764578999999997
Q gi|254780991|r 550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDL 628 (805)
Q Consensus 550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~ 628 (805)
T Consensus 405 ~P~~R~D~~D~vy~t~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~ls~~L~~~gi~h~VLNAk~~~~EA~IIA~AG 484 (775)
T PRK12326 405 KPNIREDEADRVYATAAEKNDAIVEHIAEVHETGQPVLVGTRDVAESEELAERLVRRGVPAVVLNAKNDAEEAAVIAEAG 484 (775)
T ss_pred CCCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCC
T ss_conf 98410458881646999999999999999997599889970718989999999987699830236897276999999459
Q ss_pred HCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCC------CCC-------CCCHHHHHHHHHHHCC-CCCCEEEEEECCCC
Q ss_conf 318986999845875357877711799962885------674-------4460137766543127-99866999824898
Q gi|254780991|r 629 RLGKFDVLVGINLLREGLDIPECGLVAILDADK------EGF-------LRSKTSLIQTIGRAAR-NVNSKVILYADTIT 694 (805)
Q Consensus 629 ~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~------~~f-------~~~~~~~~q~~GRagR-~~~G~~il~ad~~t 694 (805)
T Consensus 485 ~~Ga--VTIATNMAGRGTDIkL---Gg~~e~~~~~V~elGGL~VIgterheSrRIDnQLrGRaGRQGDPGsS~FflSLED 559 (775)
T PRK12326 485 KYGA--VTVSTQMAGRGTDIRL---GGSDEADHDRVVELGGLHVVGTGRHRSQRLDNQLRGRAGRQGDPGSSVFFVSWED 559 (775)
T ss_pred CCCC--EEEECCCCCCCCCEEC---CCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
T ss_conf 9998--7982336789868414---8972232478986599078521433346778676223123799986158997033
Q ss_pred HHHHHHH
Q ss_conf 8999999
Q gi|254780991|r 695 KSIQLAI 701 (805)
Q Consensus 695 ~~~~~ai 701 (805)
T Consensus 560 dL~~~~g 566 (775)
T PRK12326 560 DVVVANL 566 (775)
T ss_pred HHHHHHC
T ss_conf 8998536