HHsearch alignment for GI: 254780991 and conserved domain: PRK12898

>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.61  E-value=1.6e-06  Score=67.36  Aligned_cols=146  Identities=17%  Similarity=0.163  Sum_probs=108.2

Q ss_pred             CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf             1244677-200001331016889999998630232124662147899999999863596687325764578999999997
Q gi|254780991|r  550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDL  628 (805)
Q Consensus       550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~  628 (805)
T Consensus       455 rP~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~SE~lS~~L~~~gi~h~VLNAk~~~~EA~IIA~AG  534 (673)
T PRK12898        455 RPSQRIVLPTEVFLTLAAKWAAVAARVRELHASGRPVLVGTRSVAASERLSALLREAGLPHQVLNAKQDAEEAAIVARAG  534 (673)
T ss_pred             CCCCCEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCC
T ss_conf             97301237985856999999999999999986799889983758999999999998699756647866687999999439


Q ss_pred             HCCCCCEEEEHHHHHCCCCCCC---CC-----EEEEECCCCCCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHHHHH
Q ss_conf             3189869998458753578777---11-----7999628856744460137766543127-9986699982489889999
Q gi|254780991|r  629 RLGKFDVLVGINLLREGLDIPE---CG-----LVAILDADKEGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKSIQL  699 (805)
Q Consensus       629 ~~g~~diLvgt~~~akGlD~p~---v~-----lV~i~dAD~~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~~~~  699 (805)
T Consensus       535 ~~Ga--VTIATNMAGRGTDI~Lg~~V~~~GGLhVIgTe-----rheSrRIDnQLrGRsGRQGDPGss~f~lSleDdL~r~  607 (673)
T PRK12898        535 QRGR--ITVATNMAGRGTDIKLEPEVAARGGLHVILTE-----RHESARIDRQLAGRCGRQGDPGSSEAILSLEDDLLQQ  607 (673)
T ss_pred             CCCC--EEEECCCCCCCCCCCCCHHHHHCCCCEEEECC-----CCCHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHH
T ss_conf             9998--79702367898684767678862898898437-----5511245656423544689998514899814678987


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780991|r  700 AID  702 (805)
Q Consensus       700 ai~  702 (805)
T Consensus       608 f~~  610 (673)
T PRK12898        608 FLP  610 (673)
T ss_pred             HCC
T ss_conf             570