HHsearch alignment for GI: 254780991 and conserved domain: PRK12898
>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.61 E-value=1.6e-06 Score=67.36 Aligned_cols=146 Identities=17% Similarity=0.163 Sum_probs=108.2
Q ss_pred CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 1244677-200001331016889999998630232124662147899999999863596687325764578999999997
Q gi|254780991|r 550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDL 628 (805)
Q Consensus 550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~ 628 (805)
T Consensus 455 rP~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~SE~lS~~L~~~gi~h~VLNAk~~~~EA~IIA~AG 534 (673)
T PRK12898 455 RPSQRIVLPTEVFLTLAAKWAAVAARVRELHASGRPVLVGTRSVAASERLSALLREAGLPHQVLNAKQDAEEAAIVARAG 534 (673)
T ss_pred CCCCCEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCC
T ss_conf 97301237985856999999999999999986799889983758999999999998699756647866687999999439
Q ss_pred HCCCCCEEEEHHHHHCCCCCCC---CC-----EEEEECCCCCCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHHHHH
Q ss_conf 3189869998458753578777---11-----7999628856744460137766543127-9986699982489889999
Q gi|254780991|r 629 RLGKFDVLVGINLLREGLDIPE---CG-----LVAILDADKEGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKSIQL 699 (805)
Q Consensus 629 ~~g~~diLvgt~~~akGlD~p~---v~-----lV~i~dAD~~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~~~~ 699 (805)
T Consensus 535 ~~Ga--VTIATNMAGRGTDI~Lg~~V~~~GGLhVIgTe-----rheSrRIDnQLrGRsGRQGDPGss~f~lSleDdL~r~ 607 (673)
T PRK12898 535 QRGR--ITVATNMAGRGTDIKLEPEVAARGGLHVILTE-----RHESARIDRQLAGRCGRQGDPGSSEAILSLEDDLLQQ 607 (673)
T ss_pred CCCC--EEEECCCCCCCCCCCCCHHHHHCCCCEEEECC-----CCCHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHH
T ss_conf 9998--79702367898684767678862898898437-----5511245656423544689998514899814678987
Q ss_pred HHH
Q ss_conf 999
Q gi|254780991|r 700 AID 702 (805)
Q Consensus 700 ai~ 702 (805)
T Consensus 608 f~~ 610 (673)
T PRK12898 608 FLP 610 (673)
T ss_pred HCC
T ss_conf 570