HHsearch alignment for GI: 254780991 and conserved domain: PRK12902
>PRK12902 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.52 E-value=3.8e-06 Score=64.55 Aligned_cols=97 Identities=23% Similarity=0.272 Sum_probs=75.6
Q ss_pred CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCC--HHHHHHHHH
Q ss_conf 1244677-2000013310168899999986302321246621478999999998635966873257645--789999999
Q gi|254780991|r 550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVK--TLERIEIIR 626 (805)
Q Consensus 550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~--~~~r~~il~ 626 (805)
T Consensus 411 ~p~~R~D~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLVGT~SVe~SE~ls~lL~~~gi~h~VLNAk~~n~~~EAeIIA~ 490 (946)
T PRK12902 411 RPRRRQDWPDQVYKTEIAKWRAVANETAEMHKQGRPVLVGTTSVEKSELLSALLAEQGIPHNLLNAKPENVEREAEIVAQ 490 (946)
T ss_pred CCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf 98424627002017999999999999999975899889972757989999999985588620325786442789999994
Q ss_pred HHHCCCCCEEEEHHHHHCCCCC
Q ss_conf 9731898699984587535787
Q gi|254780991|r 627 DLRLGKFDVLVGINLLREGLDI 648 (805)
Q Consensus 627 ~~~~g~~diLvgt~~~akGlD~ 648 (805)
T Consensus 491 AG~~ga--VTIATNMAGRGTDI 510 (946)
T PRK12902 491 AGRKGA--VTIATNMAGRGTDI 510 (946)
T ss_pred CCCCCC--EEEECCCCCCCCCE
T ss_conf 699996--89745446898695