HHsearch alignment for GI: 254780991 and conserved domain: PRK12902

>PRK12902 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.52  E-value=3.8e-06  Score=64.55  Aligned_cols=97  Identities=23%  Similarity=0.272  Sum_probs=75.6

Q ss_pred             CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCC--HHHHHHHHH
Q ss_conf             1244677-2000013310168899999986302321246621478999999998635966873257645--789999999
Q gi|254780991|r  550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVK--TLERIEIIR  626 (805)
Q Consensus       550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~--~~~r~~il~  626 (805)
T Consensus       411 ~p~~R~D~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLVGT~SVe~SE~ls~lL~~~gi~h~VLNAk~~n~~~EAeIIA~  490 (946)
T PRK12902        411 RPRRRQDWPDQVYKTEIAKWRAVANETAEMHKQGRPVLVGTTSVEKSELLSALLAEQGIPHNLLNAKPENVEREAEIVAQ  490 (946)
T ss_pred             CCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf             98424627002017999999999999999975899889972757989999999985588620325786442789999994


Q ss_pred             HHHCCCCCEEEEHHHHHCCCCC
Q ss_conf             9731898699984587535787
Q gi|254780991|r  627 DLRLGKFDVLVGINLLREGLDI  648 (805)
Q Consensus       627 ~~~~g~~diLvgt~~~akGlD~  648 (805)
T Consensus       491 AG~~ga--VTIATNMAGRGTDI  510 (946)
T PRK12902        491 AGRKGA--VTIATNMAGRGTDI  510 (946)
T ss_pred             CCCCCC--EEEECCCCCCCCCE
T ss_conf             699996--89745446898695