HHsearch alignment for GI: 254780991 and conserved domain: PRK13103
>PRK13103 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.78 E-value=9.5e-07 Score=69.07 Aligned_cols=150 Identities=19% Similarity=0.227 Sum_probs=108.4
Q ss_pred CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 1244677-200001331016889999998630232124662147899999999863596687325764578999999997
Q gi|254780991|r 550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDL 628 (805)
Q Consensus 550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~ 628 (805)
T Consensus 416 ~p~~R~d~~d~iy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~Sve~SE~ls~~L~~~gi~h~VLNAk~~~~EA~Iia~AG 495 (913)
T PRK13103 416 KPLARKDFNDLVYLTAEEKYAAIITDIKECMALGRPVLVGTATIETSEHMSNLLKKEGIEHKVLNAKYHEKEAEIIAQAG 495 (913)
T ss_pred CCCCEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCC
T ss_conf 98610119986983899999999999999997499889962746889999999997699751204887379999998337
Q ss_pred HCCCCCEEEEHHHHHCCCCCC-----CCCEEEEECCCC--------------------CCC-----CC--CHHHHHHHHH
Q ss_conf 318986999845875357877-----711799962885--------------------674-----44--6013776654
Q gi|254780991|r 629 RLGKFDVLVGINLLREGLDIP-----ECGLVAILDADK--------------------EGF-----LR--SKTSLIQTIG 676 (805)
Q Consensus 629 ~~g~~diLvgt~~~akGlD~p-----~v~lV~i~dAD~--------------------~~f-----~~--~~~~~~q~~G 676 (805)
T Consensus 496 ~~ga--VTIATNMAGRGTDI~LGgn~e~~~~~~~~~~~e~~~~~~~~~~~~~~~V~~~GGL~VIgterheSrRiDnQLrG 573 (913)
T PRK13103 496 APGA--LTIATNMAGRGTDILLGGNWEVEVAALENPTPEQIAQIKADWQKRHQQVIEAGGLHVIASERHESRRIDNQLRG 573 (913)
T ss_pred CCCC--EEEECCCCCCCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCC
T ss_conf 8997--89716456898695268860344431036767789999999998877898629849996165521257878607
Q ss_pred HHCC-CCCCEEEEEECCCCHHHHHHH
Q ss_conf 3127-998669998248988999999
Q gi|254780991|r 677 RAAR-NVNSKVILYADTITKSIQLAI 701 (805)
Q Consensus 677 RagR-~~~G~~il~ad~~t~~~~~ai 701 (805)
T Consensus 574 RsGRQGDPG~s~F~lSleDdLmr~Fg 599 (913)
T PRK13103 574 RAGRQGDPGSSRFYLSLEDSLMRIFA 599 (913)
T ss_pred CCCCCCCCCCCEEEEEECHHHHHHHC
T ss_conf 43568999865489970468998857