HHsearch alignment for GI: 254780991 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=99.86 E-value=2.2e-18 Score=156.16 Aligned_cols=125 Identities=26% Similarity=0.305 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC------CEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHH
Q ss_conf 88999999863023212466214789999999986359------668732576457899999999731898699984587
Q gi|254780991|r 569 EDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERN------IRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLL 642 (805)
Q Consensus 569 ddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~------i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~ 642 (805)
T Consensus 271 ~~~~~~l~~~i~~~~~tLvF~NtR~~aE~~~~~L~~~~~~~~~~~~i~~HHgSls~e~R~~vE~~lk~G~l~~vV~TsSL 350 (878)
T PRK13767 271 EALYETLDELIQEHRTTLIFTNTRSGAERVVYKLRKRYPEEYDEDNIGAHHSSLSREVRLEVEEKLKRGELKVVVSSTSL 350 (878)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECHH
T ss_conf 99999999999838977999155899999999999853430675432220177899999999999857998689982736
Q ss_pred HCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC--CCCCEEEEEECCCCHHHH
Q ss_conf 53578777117999628856744460137766543127--998669998248988999
Q gi|254780991|r 643 REGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR--NVNSKVILYADTITKSIQ 698 (805)
Q Consensus 643 akGlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR--~~~G~~il~ad~~t~~~~ 698 (805)
T Consensus 351 ELGIDiG~Vd~Viq~g-----sP~svarllQR~GRsGH~~g~~s~g~~vp~~~~ellE 403 (878)
T PRK13767 351 ELGIDIGYIDLVVLLG-----SPKSVSRLLQRIGRAGHRLGEVSKGRIIVVDRDDLVE 403 (878)
T ss_pred HCCCCCCCCCEEEECC-----CCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHH
T ss_conf 5077777525899758-----9611899999833578999980469999798168999