HHsearch alignment for GI: 254780991 and conserved domain: PRK13833

Probab=93.64  E-value=0.57  Score=25.79  Aligned_cols=83  Identities=29%  Similarity=0.308  Sum_probs=46.0

Q ss_pred             HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCC----CEEEE---ECCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf             999988739733799863376469999999997199----78999---31634689999999986789838998621344
Q gi|254780991|r  159 QLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQR----PAIVM---APNKILAAQLYSEFKNFFPHNAVEYFVSYYDY  231 (805)
Q Consensus       159 ~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~gr----~aLvL---vPei~La~QL~~rfk~~Fp~n~V~~f~S~~~~  231 (805)
T Consensus       136 ~L~~aV~~r-~nilVsGgTGSGKTTllnaL~~~i~~~~p~eRivtIEDt~EL~~-----------~~~n~v~l~~~~---  200 (323)
T PRK13833        136 TIRSAISSR-LNIVISGGTGSGKTTLANAVIAEIVASAPEDRLVILEDTAEIQC-----------AAENAVLLHTSD---  200 (323)
T ss_pred             HHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCC-----------CCCCEEEEECCC---
T ss_conf             999999818-96899917777568999999986402893233999457501146-----------788777875169---


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH
Q ss_conf             442101555432102210358899999999999985499849982778
Q gi|254780991|r  232 YQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVS  279 (805)
Q Consensus       232 yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrS  279 (805)
T Consensus       201 ------------------~v----~-~~~Ll~~aLRmrPDRIivGEvR  225 (323)
T PRK13833        201 ------------------TV----D-MARLLKSTMRLRPDRIIVGEVR  225 (323)
T ss_pred             ------------------CC----C-HHHHHHHHHCCCCCEEEEECCC
T ss_conf             ------------------86----9-9999999744699758883006