HHsearch alignment for GI: 254780991 and conserved domain: PTZ00110

>PTZ00110 helicase; Provisional.
Probab=99.98  E-value=2.2e-29  Score=238.57  Aligned_cols=115  Identities=22%  Similarity=0.326  Sum_probs=106.5

Q ss_pred             HCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECC
Q ss_conf             02321246621478999999998635966873257645789999999973189869998458753578777117999628
Q gi|254780991|r  580 QQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDA  659 (805)
Q Consensus       580 ~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dA  659 (805)
T Consensus       426 ~~~~kvIIFvnTK~~ad~L~~~L~~~G~~a~~LHGd~~Q~eR~~~L~~Fr~G~~~ILVATDVAARGLDI~dV~~VINYD-  504 (602)
T PTZ00110        426 MDGGKILIFSETKKGADTLTKELRLDGWPALCIHGDKKQEERTWVLNEFKTGKHPIMIATDVASRGLDVRDVKYVINFD-  504 (602)
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCEEEEEC-
T ss_conf             7899689992973899999999986799579820889999999999999769998898822233155515798799958-


Q ss_pred             CCCCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHHHHH
Q ss_conf             856744460137766543127-9986699982489889999
Q gi|254780991|r  660 DKEGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKSIQL  699 (805)
Q Consensus       660 D~~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~~~~  699 (805)
T Consensus       505 ----~P~~~edYVHRIGRTGRAG~kG~A~TF~Tpd~~~~a~  541 (602)
T PTZ00110        505 ----FPNQIEDYVHRIGRTGRAGAKGASYTFLTPDKYRSAR  541 (602)
T ss_pred             ----CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHH
T ss_conf             ----9798022101356150689931699997777077899